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Strontium in PDB 1cs7: Synthetic Dna Hairpin with Stilbenediether Linker

Protein crystallography data

The structure of Synthetic Dna Hairpin with Stilbenediether Linker, PDB code: 1cs7 was solved by F.D.Lewis, X.Liu, Y.Wu, S.E.Miller, M.R.Wasielewski, R.L.Letsinger, R.Sanishvili, A.Joachimiak, V.Tereshko, M.Egli, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 8.00 / 3.20
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 27.760, 67.890, 61.830, 90.00, 96.80, 90.00
R / Rfree (%) 25.7 / 26.6

Other elements in 1cs7:

The structure of Synthetic Dna Hairpin with Stilbenediether Linker also contains other interesting chemical elements:

Bromine (Br) 4 atoms

Strontium Binding Sites:

The binding sites of Strontium atom in the Synthetic Dna Hairpin with Stilbenediether Linker (pdb code 1cs7). This binding sites where shown within 5.0 Angstroms radius around Strontium atom.
In total 4 binding sites of Strontium where determined in the Synthetic Dna Hairpin with Stilbenediether Linker, PDB code: 1cs7:
Jump to Strontium binding site number: 1; 2; 3; 4;

Strontium binding site 1 out of 4 in 1cs7

Go back to Strontium Binding Sites List in 1cs7
Strontium binding site 1 out of 4 in the Synthetic Dna Hairpin with Stilbenediether Linker


Mono view


Stereo pair view

A full contact list of Strontium with other atoms in the Sr binding site number 1 of Synthetic Dna Hairpin with Stilbenediether Linker within 5.0Å range:

Strontium binding site 2 out of 4 in 1cs7

Go back to Strontium Binding Sites List in 1cs7
Strontium binding site 2 out of 4 in the Synthetic Dna Hairpin with Stilbenediether Linker


Mono view


Stereo pair view

A full contact list of Strontium with other atoms in the Sr binding site number 2 of Synthetic Dna Hairpin with Stilbenediether Linker within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Sr404

b:54.0
occ:1.00
N2 B:DG106 5.0 38.4 1.0

Strontium binding site 3 out of 4 in 1cs7

Go back to Strontium Binding Sites List in 1cs7
Strontium binding site 3 out of 4 in the Synthetic Dna Hairpin with Stilbenediether Linker


Mono view


Stereo pair view

A full contact list of Strontium with other atoms in the Sr binding site number 3 of Synthetic Dna Hairpin with Stilbenediether Linker within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Sr403

b:51.9
occ:1.00
N2 C:DG206 4.4 38.4 1.0
C7 D:DT305 4.5 44.2 1.0

Strontium binding site 4 out of 4 in 1cs7

Go back to Strontium Binding Sites List in 1cs7
Strontium binding site 4 out of 4 in the Synthetic Dna Hairpin with Stilbenediether Linker


Mono view


Stereo pair view

A full contact list of Strontium with other atoms in the Sr binding site number 4 of Synthetic Dna Hairpin with Stilbenediether Linker within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Sr401

b:50.1
occ:1.00
N2 D:DG306 4.5 38.4 1.0
N3 D:DG306 4.8 38.4 1.0

Reference:

F.D.Lewis, X.Liu, Y.Wu, S.E.Miller, M.R.Wasielewski, R.L.Letsinger, R.Sanishvili, A.Joachimiak, V.Tereshko, M.Egli. Structure and Photoinduced Electron Transfer in Exceptionally Stable Synthetic Dna Hairpins with Stilbenediether Linkers J.Am.Chem.Soc. V. 121 9905 1999.
ISSN: ISSN 0002-7863
DOI: 10.1021/JA991934U
Page generated: Wed Dec 16 02:10:36 2020

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