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Strontium in PDB 1duc: Eiav Dutpase Dudp/Strontium Complex

Enzymatic activity of Eiav Dutpase Dudp/Strontium Complex

All present enzymatic activity of Eiav Dutpase Dudp/Strontium Complex:
3.6.1.23;

Protein crystallography data

The structure of Eiav Dutpase Dudp/Strontium Complex, PDB code: 1duc was solved by Z.Dauter, R.Persson, A.M.Rosengren, P.O.Nyman, K.S.Wilson, E.S.Cedergren-Zeppezauer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.05
Space group P 41 3 2
Cell size a, b, c (Å), α, β, γ (°) 106.700, 106.700, 106.700, 90.00, 90.00, 90.00
R / Rfree (%) 16.7 / 20.1

Strontium Binding Sites:

The binding sites of Strontium atom in the Eiav Dutpase Dudp/Strontium Complex (pdb code 1duc). This binding sites where shown within 5.0 Angstroms radius around Strontium atom.
In total only one binding site of Strontium was determined in the Eiav Dutpase Dudp/Strontium Complex, PDB code: 1duc:

Strontium binding site 1 out of 1 in 1duc

Go back to Strontium Binding Sites List in 1duc
Strontium binding site 1 out of 1 in the Eiav Dutpase Dudp/Strontium Complex


Mono view


Stereo pair view

A full contact list of Strontium with other atoms in the Sr binding site number 1 of Eiav Dutpase Dudp/Strontium Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Sr202

b:20.9
occ:1.00
O1A A:DUD201 2.5 15.6 1.0
O A:HOH209 2.7 16.9 1.0
O2B A:DUD201 2.7 16.0 1.0
O A:HOH203 2.7 16.2 1.0
O A:HOH223 2.7 23.7 1.0
PB A:DUD201 3.8 19.2 1.0
PA A:DUD201 3.8 19.7 1.0
O3A A:DUD201 4.0 19.2 1.0
O1B A:DUD201 4.2 18.3 1.0
C5' A:DUD201 4.7 17.5 1.0
O2A A:DUD201 4.8 21.9 1.0
O5' A:DUD201 4.8 20.9 1.0
O A:HOH230 4.9 33.3 1.0
OD2 A:ASP72 5.0 17.7 1.0

Reference:

Z.Dauter, R.Persson, A.M.Rosengren, P.O.Nyman, K.S.Wilson, E.S.Cedergren-Zeppezauer. Crystal Structure of Dutpase From Equine Infectious Anaemia Virus; Active Site Metal Binding in A Substrate Analogue Complex. J.Mol.Biol. V. 285 655 1999.
ISSN: ISSN 0022-2836
PubMed: 9878436
DOI: 10.1006/JMBI.1998.2332
Page generated: Wed Dec 16 02:10:35 2020

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