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Strontium in PDB 1g1j: Crystal Structure of the Oligomerization Domain From Rotavirus NSP4

Protein crystallography data

The structure of Crystal Structure of the Oligomerization Domain From Rotavirus NSP4, PDB code: 1g1j was solved by G.D.Bowman, I.M.Nodelman, C.E.Schutt, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.34 / 1.86
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 34.917, 35.908, 60.937, 90.00, 90.00, 90.00
R / Rfree (%) 21.6 / 23.9

Strontium Binding Sites:

The binding sites of Strontium atom in the Crystal Structure of the Oligomerization Domain From Rotavirus NSP4 (pdb code 1g1j). This binding sites where shown within 5.0 Angstroms radius around Strontium atom.
In total only one binding site of Strontium was determined in the Crystal Structure of the Oligomerization Domain From Rotavirus NSP4, PDB code: 1g1j:

Strontium binding site 1 out of 1 in 1g1j

Go back to Strontium Binding Sites List in 1g1j
Strontium binding site 1 out of 1 in the Crystal Structure of the Oligomerization Domain From Rotavirus NSP4


Mono view


Stereo pair view

A full contact list of Strontium with other atoms in the Sr binding site number 1 of Crystal Structure of the Oligomerization Domain From Rotavirus NSP4 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Sr201

b:19.3
occ:0.50
OE1 A:GLN123 2.4 23.4 1.0
OE1 B:GLN123 2.5 21.5 1.0
O B:HOH261 2.8 34.9 1.0
OE1 B:GLU120 2.8 31.3 1.0
CD B:GLN123 3.5 20.7 1.0
CD A:GLN123 3.5 21.5 1.0
CD B:GLU120 3.6 31.4 1.0
OE2 B:GLU120 3.7 34.6 1.0
O B:HOH202 3.8 25.4 0.5
NE2 B:GLN123 3.8 19.2 1.0
NE2 A:GLN123 3.8 21.1 1.0
O B:HOH304 4.8 34.8 1.0
CG A:GLN123 4.8 18.5 1.0
CG B:GLN123 4.8 18.5 1.0
CB A:GLN123 4.9 18.2 1.0
CB B:GLN123 4.9 17.2 1.0
O B:HOH291 5.0 46.7 1.0
CG B:GLU120 5.0 26.7 1.0

Reference:

G.D.Bowman, I.M.Nodelman, O.Levy, S.L.Lin, P.Tian, T.J.Zamb, S.A.Udem, B.Venkataraghavan, C.E.Schutt. Crystal Structure of the Oligomerization Domain of NSP4 From Rotavirus Reveals A Core Metal-Binding Site. J.Mol.Biol. V. 304 861 2000.
ISSN: ISSN 0022-2836
PubMed: 11124032
DOI: 10.1006/JMBI.2000.4250
Page generated: Wed Dec 16 02:10:35 2020

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