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    PDB 1cs7-2spt
      1cs7
      1dd9
      1duc
      1f1t
      1g1j
      1g1s
      1hyf
      1j8g
      1m6g
      1nuv
      1nvy
      1oo0
      1oq7
      1qrk
      1s8f
      1sfc
      1tjm
      1u3e
      1vc0
      1vc7
      1vq8
      1vq9
      1vqk
      1vql
      1vqm
      1vqn
      1vqo
      1vqp
      1wc3
      1wv6
      1y1h
      1ybc
      1yhq
      1yrm
      1z7f
      2awe
      2box
      2btf
      2gb9
      2glq
      2grb
      2hdf
      2hmp
      2j9q
      2pn4
      2qjk
      2qjp
      2qjy
      2rio
      2spt
    PDB 2woh-4ds7

Strontium in the structure of Neuronal Synaptic Fusion Complex (pdb 1sfc)






The binding sites of Strontium atom in the structure of Neuronal Synaptic Fusion Complex (pdb code 1sfc). This binding sites where shown with 5.0 Angstroms radius around Strontium atom.
The 1sfc structure was solved by R.B.SUTTON, A.T.BRUNGER, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)50.0-2.4
Space groupI222
a (A)98.715
b (A)111.071
c (A)198.844
alpha (°)90.00
beta (°)90.00
gamma (°)90.00
Rfactor (%)26.5
Rfree (%)30.3


Strontium Binding Sites:

Strontium binding site 1 out of 13 in 1sfc


Strontium binding site 1 out of 13 in 1sfc
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stereopicture of Strontium binding site 1 out of 13 in 1sfc
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Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Strontium in the PDB 1sfc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asp68, A: Gln71, B: Arg232, B: Asn236, I: Ser75, I: Gln76, I: Glu78, I: Thr79, A: Hoh513, I: Hoh506, I: Hoh510,

conact list:


AtomAtomDistance (A)
SrO A:Asp684.69
SrCB A:Asp684.72
SrOD2 A:Asp683.57
SrOD1 A:Asp682.42
SrCG A:Asp683.34
SrOE1 A:Gln714.72
SrNH2 B:Arg2324.10
SrOD1 B:Asn2364.90
SrO I:Ser752.49
SrCB I:Ser753.78
SrOG I:Ser752.56
SrC I:Ser753.38
SrCA I:Ser753.93
SrN I:Gln764.38
SrCA I:Gln764.68
SrOE1 I:Glu782.54
SrCB I:Glu784.73
SrOE2 I:Glu784.21
SrCD I:Glu783.65
SrCG I:Glu784.79
SrN I:Thr794.21
SrCB I:Thr793.82
SrCG2 I:Thr794.78
SrOG1 I:Thr792.43
SrCA I:Thr794.42
SrO A:Hoh5132.26
SrO I:Hoh5062.50
SrO I:Hoh5102.31

interactive model:


Strontium binding site 2 out of 13 in 1sfc


Strontium binding site 2 out of 13 in 1sfc
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stereopicture of Strontium binding site 2 out of 13 in 1sfc
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Strontium in the PDB 1sfc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ser75, A: Gln76, A: Glu78, A: Thr79, I: Asp68, I: Gln71, J: Arg232, J: Asn236, I: Mpd930, A: Hoh507, I: Hoh502,

conact list:


AtomAtomDistance (A)
SrO A:Ser752.43
SrCB A:Ser753.79
SrOG A:Ser752.79
SrC A:Ser753.21
SrCA A:Ser753.78
SrN A:Gln764.18
SrCA A:Gln764.55
SrOE1 A:Glu782.96
SrCB A:Glu784.63
SrCD A:Glu784.21
SrCG A:Glu785.00
SrN A:Thr794.28
SrCB A:Thr793.95
SrOG1 A:Thr792.67
SrCA A:Thr794.56
SrOD2 I:Asp683.77
SrOD1 I:Asp682.69
SrCG I:Asp683.61
SrNE2 I:Gln714.78
SrOE1 I:Gln714.85
SrNH2 J:Arg2324.34
SrND2 J:Asn2364.99
SrC5 I:Mpd9303.20
SrC4 I:Mpd9303.84
SrC3 I:Mpd9304.65
SrO A:Hoh5072.55
SrO I:Hoh5024.72

interactive model:


Strontium binding site 3 out of 13 in 1sfc


Strontium binding site 3 out of 13 in 1sfc
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stereopicture of Strontium binding site 3 out of 13 in 1sfc
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 3 of Strontium in the PDB 1sfc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: B: Asp214, B: Asp218,

conact list:


AtomAtomDistance (A)
SrCB B:Asp2144.49
SrOD2 B:Asp2144.85
SrOD2 B:Asp2183.39
SrOD1 B:Asp2183.50
SrCG B:Asp2183.86

interactive model:


Strontium binding site 4 out of 13 in 1sfc


Strontium binding site 4 out of 13 in 1sfc
Click to enlarge
stereopicture of Strontium binding site 4 out of 13 in 1sfc
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 4 of Strontium in the PDB 1sfc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: C: Sr296, C: Hoh519,

conact list:


AtomAtomDistance (A)
SrSR C:Sr2963.74
SrO C:Hoh5193.00

interactive model:


Strontium binding site 5 out of 13 in 1sfc


Strontium binding site 5 out of 13 in 1sfc
Click to enlarge
stereopicture of Strontium binding site 5 out of 13 in 1sfc
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 5 of Strontium in the PDB 1sfc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: C: Glu37, C: Sr295, C: Hoh519,

conact list:


AtomAtomDistance (A)
SrOE2 C:Glu374.35
SrSR C:Sr2953.74
SrO C:Hoh5193.00

interactive model:


Strontium binding site 6 out of 13 in 1sfc


Strontium binding site 6 out of 13 in 1sfc
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stereopicture of Strontium binding site 6 out of 13 in 1sfc
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 6 of Strontium in the PDB 1sfc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: C: Asp58, D: Glu170, D: Thr173, D: Gln174, D: Gln177, D: Hoh516,

conact list:


AtomAtomDistance (A)
SrOD2 C:Asp584.53
SrOD1 C:Asp584.57
SrCG C:Asp584.98
SrOE1 D:Glu1704.63
SrOE2 D:Glu1703.92
SrCD D:Glu1704.71
SrCG2 D:Thr1734.83
SrCG D:Gln1744.99
SrOE1 D:Gln1774.69
SrO D:Hoh5162.42

interactive model:


Strontium binding site 7 out of 13 in 1sfc


Strontium binding site 7 out of 13 in 1sfc
Click to enlarge
stereopicture of Strontium binding site 7 out of 13 in 1sfc
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 7 of Strontium in the PDB 1sfc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: F: Asp242, F: Glu245, J: Asp242, J: Glu245, J: Arg246, F: Hoh504, F: Hoh509, F: Hoh511, F: Hoh512, J: Hoh508,

conact list:


AtomAtomDistance (A)
SrCB F:Asp2424.68
SrOD2 F:Asp2424.81
SrOD1 F:Asp2422.69
SrCG F:Asp2423.91
SrCA F:Asp2424.49
SrOE1 F:Glu2452.61
SrOE2 F:Glu2453.71
SrCD F:Glu2453.43
SrCG F:Glu2454.69
SrCB J:Asp2424.54
SrOD2 J:Asp2424.23
SrOD1 J:Asp2422.56
SrCG J:Asp2423.57
SrCA J:Asp2424.41
SrOE1 J:Glu2453.90
SrOE2 J:Glu2452.78
SrCD J:Glu2453.61
SrCG J:Glu2454.83
SrCZ J:Arg2464.96
SrNH2 J:Arg2464.05
SrO F:Hoh5042.57
SrO F:Hoh5093.10
SrO F:Hoh5113.09
SrO F:Hoh5123.18
SrO J:Hoh5082.65

interactive model:


Strontium binding site 8 out of 13 in 1sfc


Strontium binding site 8 out of 13 in 1sfc
Click to enlarge
stereopicture of Strontium binding site 8 out of 13 in 1sfc
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 8 of Strontium in the PDB 1sfc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: F: Asp214, F: Asp218, F: Hoh501,

conact list:


AtomAtomDistance (A)
SrO F:Asp2144.67
SrCB F:Asp2144.75
SrOD2 F:Asp2142.81
SrOD1 F:Asp2143.04
SrCG F:Asp2143.27
SrCB F:Asp2184.82
SrOD2 F:Asp2183.07
SrOD1 F:Asp2182.79
SrCG F:Asp2183.31
SrO F:Hoh5012.58

interactive model:


Strontium binding site 9 out of 13 in 1sfc


Strontium binding site 9 out of 13 in 1sfc
Click to enlarge
stereopicture of Strontium binding site 9 out of 13 in 1sfc
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 9 of Strontium in the PDB 1sfc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: G: Asp51, G: Glu55, G: Sr299, G: Sr300,

conact list:


AtomAtomDistance (A)
SrOD2 G:Asp512.76
SrOD1 G:Asp513.89
SrCG G:Asp513.70
SrOE1 G:Glu554.59
SrOE2 G:Glu552.38
SrCD G:Glu553.54
SrCG G:Glu554.07
SrSR G:Sr2993.31
SrSR G:Sr3003.55

interactive model:


Strontium binding site 10 out of 13 in 1sfc


Strontium binding site 10 out of 13 in 1sfc
Click to enlarge
stereopicture of Strontium binding site 10 out of 13 in 1sfc
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 10 of Strontium in the PDB 1sfc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: G: Asp51, G: Glu55, G: Sr298,

conact list:


AtomAtomDistance (A)
SrOD2 G:Asp514.43
SrOD1 G:Asp513.63
SrCG G:Asp514.46
SrOE2 G:Glu554.75
SrSR G:Sr2983.31

interactive model:


Strontium binding site 11 out of 13 in 1sfc


Strontium binding site 11 out of 13 in 1sfc
Click to enlarge
stereopicture of Strontium binding site 11 out of 13 in 1sfc
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 11 of Strontium in the PDB 1sfc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: G: Glu52, G: Glu55, G: Sr298, K: Mpd929,

conact list:


AtomAtomDistance (A)
SrOE1 G:Glu524.05
SrOE1 G:Glu553.29
SrOE2 G:Glu552.55
SrCD G:Glu553.29
SrCG G:Glu554.75
SrSR G:Sr2983.55
SrC5 K:Mpd9293.70

interactive model:


Strontium binding site 12 out of 13 in 1sfc


Strontium binding site 12 out of 13 in 1sfc
Click to enlarge
stereopicture of Strontium binding site 12 out of 13 in 1sfc
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 12 of Strontium in the PDB 1sfc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: J: Asp214, J: Asp218,

conact list:


AtomAtomDistance (A)
SrCB J:Asp2144.57
SrOD2 J:Asp2143.82
SrOD1 J:Asp2144.90
SrCG J:Asp2144.24
SrOD2 J:Asp2183.44
SrOD1 J:Asp2183.45
SrCG J:Asp2183.86

interactive model:


Strontium binding site 13 out of 13 in 1sfc


Strontium binding site 13 out of 13 in 1sfc
Click to enlarge
stereopicture of Strontium binding site 13 out of 13 in 1sfc
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 13 of Strontium in the PDB 1sfc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: K: Glu37, K: Asp41,

conact list:


AtomAtomDistance (A)
SrOE1 K:Glu373.47
SrOE2 K:Glu372.99
SrCD K:Glu373.47
SrCG K:Glu374.72
SrOD2 K:Asp414.18
SrOD1 K:Asp414.32
SrCG K:Asp414.71

interactive model:




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