Atomistry » Strontium » PDB 2hdf-3i5a » 2xrm
Atomistry »
  Strontium »
    PDB 2hdf-3i5a »
      2xrm »

Strontium in PDB 2xrm: Processed Intracellular Subtilisin From B. Clausii

Enzymatic activity of Processed Intracellular Subtilisin From B. Clausii

All present enzymatic activity of Processed Intracellular Subtilisin From B. Clausii:
3.4.21.62;

Protein crystallography data

The structure of Processed Intracellular Subtilisin From B. Clausii, PDB code: 2xrm was solved by M.Gamble, G.Kunze, E.J.Dodson, D.D.Jones, K.S.Wilson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 66.49 / 2.60
Space group I 2 3
Cell size a, b, c (Å), α, β, γ (°) 132.982, 132.982, 132.982, 90.00, 90.00, 90.00
R / Rfree (%) 19.8 / 28.1

Other elements in 2xrm:

The structure of Processed Intracellular Subtilisin From B. Clausii also contains other interesting chemical elements:

Sodium (Na) 1 atom
Calcium (Ca) 1 atom

Strontium Binding Sites:

The binding sites of Strontium atom in the Processed Intracellular Subtilisin From B. Clausii (pdb code 2xrm). This binding sites where shown within 5.0 Angstroms radius around Strontium atom.
In total only one binding site of Strontium was determined in the Processed Intracellular Subtilisin From B. Clausii, PDB code: 2xrm:

Strontium binding site 1 out of 1 in 2xrm

Go back to Strontium Binding Sites List in 2xrm
Strontium binding site 1 out of 1 in the Processed Intracellular Subtilisin From B. Clausii


Mono view


Stereo pair view

A full contact list of Strontium with other atoms in the Sr binding site number 1 of Processed Intracellular Subtilisin From B. Clausii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Sr403

b:51.1
occ:1.00
OH5 A:1PE410 2.0 53.6 1.0
C25 A:1PE410 2.3 52.5 1.0
C15 A:1PE410 2.3 59.8 1.0
O A:VAL203 2.4 47.2 1.0
O A:ASN201 2.5 58.5 1.0
OD2 A:ASP226 2.5 45.0 1.0
OD1 A:ASP226 2.5 44.7 1.0
OH6 A:1PE410 2.6 59.9 1.0
C14 A:1PE410 2.7 47.8 1.0
CG A:ASP226 2.9 46.0 1.0
OH4 A:1PE410 3.0 48.7 1.0
C24 A:1PE410 3.5 48.5 1.0
C A:ASN201 3.5 55.9 1.0
C A:VAL203 3.7 49.4 1.0
C13 A:1PE410 4.0 59.5 1.0
C23 A:1PE410 4.2 65.2 1.0
N A:VAL203 4.2 53.5 1.0
CA A:ASN201 4.2 53.0 1.0
CB A:ASP226 4.4 42.1 1.0
CA A:ILE204 4.5 46.0 1.0
O A:GLU224 4.5 52.1 1.0
N A:ILE204 4.5 47.2 1.0
O A:TYR200 4.5 69.0 1.0
CA A:VAL203 4.6 50.4 1.0
N A:GLU202 4.6 53.1 1.0
ND2 A:ASN201 4.6 50.7 1.0
C A:GLU202 4.6 54.6 1.0
N A:ALA205 4.8 47.2 1.0
CG A:ASN201 4.8 50.2 1.0
OH A:TYR281 4.8 55.6 1.0
OE1 A:GLU224 4.8 67.5 1.0
CE1 A:TYR281 4.9 43.8 1.0

Reference:

M.Gamble, G.Kunze, E.J.Dodson, K.S.Wilson, D.D.Jones. Regulation of An Intracellular Subtilisin Protease Activity By A Short Propeptide Sequence Through An Original Combined Dual Mechanism. Proc.Natl.Acad.Sci.Usa V. 108 3536 2011.
ISSN: ISSN 0027-8424
PubMed: 21307308
DOI: 10.1073/PNAS.1014229108
Page generated: Wed Dec 16 02:16:14 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy