Strontium in the structure of Co-Crystal Structure of Tiamulin Bound to the Large Ribosomal Subunit (pdb 3g4s)

The binding sites of Strontium atom in the structure of Co-Crystal Structure of Tiamulin Bound to the Large Ribosomal Subunit (pdb code 3g4s). This binding sites where shown with 5.0 Angstroms radius around Strontium atom. The 3g4s structure was solved by G.GUREL, G.BLAHA, P.B.MOORE, T.A.STEITZ, with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 49.8-3.2 Space group C2221 a (A) 212.270 b (A) 299.840 c (A) 574.137 alpha (°) 90.00 beta (°) 90.00 gamma (°) 90.00 Rfactor (%) 21.5 Rfree (%) 29 Strontium Binding Sites: Strontium binding site 1 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: U823, 0: G824, 0: C853, 0: G854, 0: Hoh2936, 0: Hoh3123, 0: Hoh3276, 0: Hoh5907, 0: Hoh8680, conact list: Atom Atom Distance (A) Sr C6 0:U823 4.79 Sr C5 0:U823 4.59 Sr OP2 0:U823 4.06 Sr O5' 0:U823 4.86 Sr N9 0:G824 4.62 Sr C8 0:G824 3.28 Sr C6 0:G824 4.78 Sr C5 0:G824 4.05 Sr N7 0:G824 2.77 Sr OP2 0:G824 3.99 Sr O5' 0:G824 4.85 Sr O6 0:G824 4.68 Sr OP2 0:C853 4.37 Sr O5' 0:C853 4.94 Sr N9 0:G854 4.73 Sr C8 0:G854 3.38 Sr C6 0:G854 4.99 Sr C5 0:G854 4.23 Sr N7 0:G854 2.95 Sr OP2 0:G854 4.26 Sr O5' 0:G854 4.96 Sr O6 0:G854 4.90 Sr O 0:Hoh2936 3.31 Sr O 0:Hoh3123 3.12 Sr O 0:Hoh3276 3.10 Sr O 0:Hoh5907 4.94 Sr O 0:Hoh8680 2.92 interactive model: Strontium binding site 2 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: U835, 0: G836, 0: U837, 0: C2614, 0: U2615, B: Gln230, 0: Hoh3107, 0: Hoh3253, 0: Hoh3694, 0: Hoh3914, 0: Hoh3980, 0: Hoh4236, 0: Hoh4988, 0: Hoh6446, 0: Hoh8488, 0: Hoh8713, conact list: Atom Atom Distance (A) Sr O3' 0:U835 4.80 Sr OP1 0:G836 2.65 Sr P 0:G836 3.47 Sr OP2 0:G836 3.53 Sr C5' 0:G836 4.17 Sr O5' 0:G836 4.21 Sr OP2 0:U837 4.94 Sr O3' 0:C2614 4.77 Sr OP1 0:U2615 2.68 Sr P 0:U2615 4.03 Sr OP2 0:U2615 4.60 Sr O B:Gln230 4.45 Sr OE1 B:Gln230 3.00 Sr CB B:Gln230 3.91 Sr CD B:Gln230 3.95 Sr C B:Gln230 4.99 Sr CG B:Gln230 4.21 Sr CA B:Gln230 4.50 Sr O 0:Hoh3107 4.58 Sr O 0:Hoh3253 4.26 Sr O 0:Hoh3694 3.88 Sr O 0:Hoh3914 3.53 Sr O 0:Hoh3980 3.28 Sr O 0:Hoh4236 3.00 Sr O 0:Hoh4988 4.93 Sr O 0:Hoh6446 4.84 Sr O 0:Hoh8488 3.33 Sr O 0:Hoh8713 4.87 interactive model: Strontium binding site 3 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 3 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: A1487, 0: U1488, 0: G1489, 0: G1491, 0: Hoh4367, 0: Hoh5539, 0: Hoh5552, 0: Hoh5697, 0: Hoh8278, 0: Hoh8679, conact list: Atom Atom Distance (A) Sr OP1 0:A1487 4.79 Sr P 0:A1487 4.94 Sr OP2 0:A1487 4.01 Sr O3' 0:U1488 4.95 Sr OP2 0:U1488 4.84 Sr OP1 0:G1489 3.47 Sr P 0:G1489 3.67 Sr OP2 0:G1489 2.93 Sr O5' 0:G1489 4.66 Sr C6 0:G1491 3.97 Sr C5 0:G1491 4.69 Sr N7 0:G1491 4.66 Sr O6 0:G1491 2.87 Sr O 0:Hoh4367 2.87 Sr O 0:Hoh5539 2.99 Sr O 0:Hoh5552 4.62 Sr O 0:Hoh5697 3.12 Sr O 0:Hoh8278 3.55 Sr O 0:Hoh8679 3.10 interactive model: Strontium binding site 4 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 4 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G642, 0: A643, 0: U904, 0: A1352, 0: C1353, 0: G1354, 0: A1355, L: Arg8, 0: Hoh4531, 0: Hoh6104, 0: Hoh7482, 0: Hoh7535, conact list: Atom Atom Distance (A) Sr OP1 0:G642 4.55 Sr P 0:G642 4.95 Sr OP2 0:G642 4.92 Sr O5' 0:G642 4.82 Sr OP1 0:A643 3.93 Sr P 0:A643 3.84 Sr OP2 0:A643 2.88 Sr O5' 0:A643 4.66 Sr N3 0:U904 4.55 Sr O4 0:U904 4.45 Sr O2' 0:A1352 4.63 Sr OP1 0:C1353 3.87 Sr C3' 0:C1353 4.61 Sr P 0:C1353 4.72 Sr O3' 0:C1353 3.85 Sr C5' 0:C1353 3.94 Sr C4' 0:C1353 4.73 Sr O5' 0:C1353 4.14 Sr OP1 0:G1354 2.76 Sr P 0:G1354 3.87 Sr OP2 0:G1354 4.92 Sr O5' 0:G1354 4.84 Sr N6 0:A1355 5.00 Sr NH2 L:Arg8 4.54 Sr O 0:Hoh4531 2.95 Sr O 0:Hoh6104 3.44 Sr O 0:Hoh7482 3.18 Sr O 0:Hoh7535 3.61 interactive model: Strontium binding site 5 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 5 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G834, 0: C849, 0: C1738, 0: A1754, 0: A1755, 0: Hoh6117, 0: Hoh6927, 0: Hoh7035, 0: Hoh7509, conact list: Atom Atom Distance (A) Sr N3 0:G834 4.94 Sr N2 0:G834 4.29 Sr O2 0:C849 4.49 Sr OP1 0:C1738 4.14 Sr P 0:C1738 4.82 Sr OP2 0:C1738 4.39 Sr O3' 0:A1754 3.93 Sr OP1 0:A1755 2.75 Sr P 0:A1755 3.90 Sr OP2 0:A1755 4.91 Sr C5' 0:A1755 4.88 Sr O5' 0:A1755 4.94 Sr O 0:Hoh6117 4.32 Sr O 0:Hoh6927 3.18 Sr O 0:Hoh7035 3.08 Sr O 0:Hoh7509 2.99 interactive model: Strontium binding site 6 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 6 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G891, 0: G892, 0: C893, 1: Lys53, 0: Hoh3095, 0: Hoh4776, 0: Hoh5674, 0: Hoh5824, 0: Hoh7673, 0: Hoh8609, C: Hoh4236, C: Hoh6325, 1: Hoh401, conact list: Atom Atom Distance (A) Sr OP2 0:G891 4.98 Sr C8 0:G892 4.84 Sr N7 0:G892 4.24 Sr OP2 0:G892 4.74 Sr N3 0:C893 4.81 Sr C3' 0:C893 4.89 Sr C2 0:C893 3.85 Sr N1 0:C893 4.44 Sr C1' 0:C893 4.11 Sr O2 0:C893 2.80 Sr O3' 0:C893 4.49 Sr C2' 0:C893 3.98 Sr O2' 0:C893 2.80 Sr NZ 1:Lys53 4.56 Sr O 0:Hoh3095 4.24 Sr O 0:Hoh4776 4.49 Sr O 0:Hoh5674 3.12 Sr O 0:Hoh5824 4.04 Sr O 0:Hoh7673 3.19 Sr O 0:Hoh8609 3.16 Sr O C:Hoh4236 4.50 Sr O C:Hoh6325 3.36 Sr O 1:Hoh401 3.20 interactive model: Strontium binding site 7 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 7 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G1053, 0: G1054, 0: G1055, H: Asp13, H: Lys14, 0: Hoh3682, 0: Hoh4902, 0: Hoh5065, 0: Hoh5761, 0: Hoh8478, 0: Hoh8772, conact list: Atom Atom Distance (A) Sr OP2 0:G1053 4.96 Sr N7 0:G1054 4.39 Sr OP2 0:G1054 4.63 Sr C6 0:G1055 4.16 Sr C5 0:G1055 4.70 Sr N7 0:G1055 4.44 Sr O6 0:G1055 3.09 Sr O H:Asp13 3.60 Sr CB H:Asp13 3.94 Sr C H:Asp13 4.08 Sr OD1 H:Asp13 4.39 Sr CG H:Asp13 4.43 Sr CA H:Asp13 4.63 Sr N H:Lys14 4.76 Sr O 0:Hoh3682 3.45 Sr O 0:Hoh4902 3.93 Sr O 0:Hoh5065 2.98 Sr O 0:Hoh5761 3.08 Sr O 0:Hoh8478 2.98 Sr O 0:Hoh8772 3.87 interactive model: Strontium binding site 8 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 8 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: U146, 0: G147, 0: G182, 0: A183, M: Asp157, 0: Hoh7006, 0: Hoh8355, M: Hoh7525, conact list: Atom Atom Distance (A) Sr C3' 0:U146 4.37 Sr O3' 0:U146 3.19 Sr C2' 0:U146 4.81 Sr C4' 0:U146 4.65 Sr O2' 0:U146 4.04 Sr OP1 0:G147 3.03 Sr P 0:G147 3.73 Sr C5' 0:G147 4.11 Sr O5' 0:G147 4.43 Sr C3' 0:G182 4.92 Sr O3' 0:G182 3.77 Sr C5' 0:G182 4.95 Sr OP1 0:A183 3.27 Sr P 0:A183 4.19 Sr OD2 M:Asp157 2.94 Sr OD1 M:Asp157 3.53 Sr CG M:Asp157 3.62 Sr O 0:Hoh7006 4.36 Sr O 0:Hoh8355 3.12 Sr O M:Hoh7525 3.42 interactive model: Strontium binding site 9 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 9 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: A536, 0: C2077, 0: G2079, 0: Hoh4603, 0: Hoh5508, 0: Hoh5546, 0: Hoh6103, 0: Hoh6121, 0: Hoh6543, 0: Hoh7824, 0: Hoh7825, 0: Hoh8329, 0: Hoh8417, 0: Hoh8770, 0: Hoh9075, conact list: Atom Atom Distance (A) Sr N6 0:A536 4.89 Sr OP2 0:C2077 4.52 Sr N7 0:G2079 4.82 Sr O 0:Hoh4603 3.38 Sr O 0:Hoh5508 3.61 Sr O 0:Hoh5546 4.83 Sr O 0:Hoh6103 3.46 Sr O 0:Hoh6121 3.20 Sr O 0:Hoh6543 4.78 Sr O 0:Hoh7824 3.07 Sr O 0:Hoh7825 3.88 Sr O 0:Hoh8329 3.65 Sr O 0:Hoh8417 2.99 Sr O 0:Hoh8770 4.09 Sr O 0:Hoh9075 4.11 interactive model: Strontium binding site 10 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 10 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: A1747, 0: U1748, 0: U1749, 0: G1751, 0: G2584, 0: G2585, 0: U2586, 0: Sr8982, 0: Hoh5420, 0: Hoh5778, 0: Hoh8113, 0: Hoh8286, 0: Hoh8466, conact list: Atom Atom Distance (A) Sr P 0:A1747 4.51 Sr O3' 0:A1747 4.91 Sr OP2 0:A1747 3.06 Sr C5' 0:A1747 4.88 Sr OP1 0:U1748 3.92 Sr P 0:U1748 3.82 Sr OP2 0:U1748 2.79 Sr O5' 0:U1748 4.85 Sr N3 0:U1749 4.79 Sr C5 0:U1749 3.75 Sr C4 0:U1749 3.56 Sr O4 0:U1749 2.89 Sr OP1 0:G1751 4.52 Sr O3' 0:G2584 4.64 Sr OP1 0:G2585 2.71 Sr P 0:G2585 3.38 Sr OP2 0:G2585 3.18 Sr C5' 0:G2585 4.93 Sr O5' 0:G2585 4.37 Sr P 0:U2586 4.79 Sr OP2 0:U2586 3.74 Sr SR 0:Sr8982 4.39 Sr O 0:Hoh5420 3.91 Sr O 0:Hoh5778 3.47 Sr O 0:Hoh8113 4.98 Sr O 0:Hoh8286 4.96 Sr O 0:Hoh8466 3.13 interactive model: Strontium binding site 11 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 11 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: C85, 0: A86, 0: C87, T: Asp68, 0: Sr8939, 0: Hoh4403, conact list: Atom Atom Distance (A) Sr OP1 0:C85 3.01 Sr P 0:C85 4.27 Sr OP2 0:C85 4.82 Sr C5' 0:C85 4.86 Sr O5' 0:C85 4.77 Sr OP1 0:A86 4.94 Sr C3' 0:A86 4.28 Sr P 0:A86 4.28 Sr O3' 0:A86 4.74 Sr OP2 0:A86 2.98 Sr C5' 0:A86 4.57 Sr C4' 0:A86 4.87 Sr O5' 0:A86 4.75 Sr OP1 0:C87 3.29 Sr P 0:C87 4.13 Sr OP2 0:C87 4.10 Sr OD2 T:Asp68 3.33 Sr OD1 T:Asp68 3.08 Sr CG T:Asp68 3.58 Sr SR 0:Sr8939 4.70 Sr O 0:Hoh4403 3.18 interactive model: Strontium binding site 12 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 12 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: A761, 0: C896, 0: A897, 0: Hoh3151, 0: Hoh3756, 0: Hoh4066, 0: Hoh4220, 0: Hoh6427, 0: Hoh6714, 0: Hoh7234, 0: Hoh7602, 0: Hoh7955, 0: Hoh8884, conact list: Atom Atom Distance (A) Sr OP1 0:A761 4.45 Sr C5 0:C896 4.75 Sr OP2 0:C896 4.07 Sr N7 0:A897 4.88 Sr OP2 0:A897 4.31 Sr O 0:Hoh3151 3.21 Sr O 0:Hoh3756 3.05 Sr O 0:Hoh4066 3.35 Sr O 0:Hoh4220 3.23 Sr O 0:Hoh6427 4.24 Sr O 0:Hoh6714 4.62 Sr O 0:Hoh7234 3.42 Sr O 0:Hoh7602 3.59 Sr O 0:Hoh7955 4.26 Sr O 0:Hoh8884 4.32 interactive model: Strontium binding site 13 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 13 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: C663, 0: U664, 0: G681, C: Asp104, 0: Hoh5307, 0: Hoh6600, C: Hoh1269, conact list: Atom Atom Distance (A) Sr C3' 0:C663 4.56 Sr C6 0:C663 4.01 Sr C5 0:C663 4.09 Sr O3' 0:C663 4.93 Sr OP2 0:C663 4.64 Sr O5' 0:C663 4.70 Sr P 0:U664 4.16 Sr O4' 0:U664 4.63 Sr OP2 0:U664 3.59 Sr C5' 0:U664 4.40 Sr O5' 0:U664 3.38 Sr C8 0:G681 4.73 Sr C6 0:G681 3.81 Sr C5 0:G681 4.00 Sr N7 0:G681 3.57 Sr O6 0:G681 3.11 Sr OD2 C:Asp104 4.66 Sr O 0:Hoh5307 4.52 Sr O 0:Hoh6600 4.28 Sr O C:Hoh1269 3.32 interactive model: Strontium binding site 14 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 14 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: C1420, 0: C1421, 0: A1437, 0: G1438, 0: Hoh3736, 0: Hoh4507, 0: Hoh4965, 0: Hoh5177, 0: Hoh8828, conact list: Atom Atom Distance (A) Sr OP1 0:C1420 2.87 Sr P 0:C1420 4.32 Sr O3' 0:C1420 4.29 Sr C5' 0:C1420 4.78 Sr O5' 0:C1420 4.89 Sr OP1 0:C1421 3.86 Sr P 0:C1421 3.82 Sr OP2 0:C1421 3.05 Sr O3' 0:A1437 4.05 Sr OP1 0:G1438 3.02 Sr P 0:G1438 4.10 Sr C5' 0:G1438 4.20 Sr O5' 0:G1438 4.61 Sr O 0:Hoh3736 3.24 Sr O 0:Hoh4507 3.77 Sr O 0:Hoh4965 3.82 Sr O 0:Hoh5177 3.84 Sr O 0:Hoh8828 4.20 interactive model: Strontium binding site 15 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 15 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: A25, 0: U454, 0: A477, 0: C478, 0: Na8551, 0: Hoh2962, 0: Hoh3315, 0: Hoh3472, 0: Hoh4802, 0: Hoh8350, 0: Hoh8661, 0: Hoh8789, 0: Hoh9046, conact list: Atom Atom Distance (A) Sr OP1 0:A25 4.38 Sr C6 0:U454 4.49 Sr C5 0:U454 4.42 Sr P 0:U454 4.65 Sr OP2 0:U454 3.36 Sr O3' 0:A477 4.43 Sr OP1 0:C478 2.80 Sr P 0:C478 4.15 Sr C5' 0:C478 4.48 Sr O5' 0:C478 4.79 Sr NA 0:Na8551 3.86 Sr O 0:Hoh2962 4.36 Sr O 0:Hoh3315 3.56 Sr O 0:Hoh3472 4.19 Sr O 0:Hoh4802 3.13 Sr O 0:Hoh8350 4.23 Sr O 0:Hoh8661 3.19 Sr O 0:Hoh8789 4.60 Sr O 0:Hoh9046 3.34 interactive model: Strontium binding site 16 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 16 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: U1412, 0: U1503, 0: A1504, 0: A1678, 0: C1679, 0: Hoh3079, 0: Hoh5544, 0: Hoh7746, 0: Hoh7747, 0: Hoh7767, 0: Hoh8393, conact list: Atom Atom Distance (A) Sr OP1 0:U1412 4.46 Sr OP2 0:U1412 4.99 Sr O3' 0:U1503 4.77 Sr OP1 0:A1504 2.95 Sr P 0:A1504 4.07 Sr OP2 0:A1504 4.35 Sr OP1 0:A1678 2.90 Sr P 0:A1678 4.25 Sr O3' 0:A1678 4.97 Sr OP2 0:A1678 4.83 Sr O5' 0:A1678 4.90 Sr OP1 0:C1679 3.54 Sr P 0:C1679 3.57 Sr OP2 0:C1679 2.83 Sr O5' 0:C1679 4.28 Sr O 0:Hoh3079 4.65 Sr O 0:Hoh5544 3.25 Sr O 0:Hoh7746 3.41 Sr O 0:Hoh7747 3.69 Sr O 0:Hoh7767 4.03 Sr O 0:Hoh8393 3.52 interactive model: Strontium binding site 17 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 17 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: C2542, 0: G2543, 0: U2590, 0: C2608, 0: Hoh5813, 0: Hoh6069, 0: Hoh8203, conact list: Atom Atom Distance (A) Sr O3' 0:C2542 4.43 Sr OP1 0:G2543 3.69 Sr P 0:G2543 4.72 Sr O2 0:U2590 4.71 Sr N3 0:C2608 3.37 Sr C2 0:C2608 3.93 Sr O2 0:C2608 3.77 Sr C4 0:C2608 4.26 Sr N4 0:C2608 4.38 Sr O 0:Hoh5813 3.74 Sr O 0:Hoh6069 4.03 Sr O 0:Hoh8203 3.95 interactive model: Strontium binding site 18 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 18 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G2471, 0: G2630, 0: G2632, 0: A2633, 0: Hoh3292, 0: Hoh4565, 0: Hoh5594, 0: Hoh5901, 0: Hoh6025, 0: Hoh7644, conact list: Atom Atom Distance (A) Sr O2' 0:G2471 4.43 Sr O2' 0:G2630 4.90 Sr C6 0:G2632 3.84 Sr N1 0:G2632 4.16 Sr O6 0:G2632 2.83 Sr N6 0:A2633 4.36 Sr O 0:Hoh3292 3.81 Sr O 0:Hoh4565 3.29 Sr O 0:Hoh5594 3.25 Sr O 0:Hoh5901 3.43 Sr O 0:Hoh6025 4.56 Sr O 0:Hoh7644 3.66 interactive model: Strontium binding site 19 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 19 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: C1404, 0: A1716, 0: A1717, 0: G1718, 0: G1719, 0: Hoh3305, 0: Hoh4387, 0: Hoh5827, 0: Hoh6621, 0: Hoh8700, conact list: Atom Atom Distance (A) Sr N4 0:C1404 4.51 Sr C3' 0:A1716 4.84 Sr O3' 0:A1716 4.95 Sr OP2 0:A1716 4.82 Sr C5' 0:A1716 4.31 Sr P 0:A1717 4.29 Sr OP2 0:A1717 2.84 Sr O5' 0:A1717 4.91 Sr C8 0:G1718 4.46 Sr C6 0:G1718 3.91 Sr C5 0:G1718 3.95 Sr N7 0:G1718 3.32 Sr O6 0:G1718 3.22 Sr C6 0:G1719 4.51 Sr C5 0:G1719 5.00 Sr N7 0:G1719 4.79 Sr O6 0:G1719 3.59 Sr O 0:Hoh3305 3.30 Sr O 0:Hoh4387 3.07 Sr O 0:Hoh5827 4.00 Sr O 0:Hoh6621 3.43 Sr O 0:Hoh8700 3.05 interactive model: Strontium binding site 20 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 20 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G469, 0: U470, 0: G471, 0: A882, 0: Hoh3087, 0: Hoh3690, 0: Hoh3805, 0: Hoh4758, 0: Hoh5374, 0: Hoh6725, 0: Hoh7398, conact list: Atom Atom Distance (A) Sr C3' 0:G469 4.72 Sr C1' 0:G469 4.87 Sr O3' 0:G469 4.42 Sr O4' 0:G469 4.89 Sr C2' 0:G469 4.38 Sr C4' 0:G469 4.49 Sr O2' 0:G469 3.17 Sr C5 0:U470 4.97 Sr C6 0:G471 4.29 Sr O6 0:G471 3.08 Sr OP2 0:A882 4.89 Sr O 0:Hoh3087 3.95 Sr O 0:Hoh3690 3.60 Sr O 0:Hoh3805 3.05 Sr O 0:Hoh4758 3.14 Sr O 0:Hoh5374 4.52 Sr O 0:Hoh6725 3.86 Sr O 0:Hoh7398 4.61 interactive model: Strontium binding site 21 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 21 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G1059, 0: C1127, 0: U1128, 0: U2069, 0: G2070, 0: Hoh3339, 0: Hoh3744, 0: Hoh4273, 0: Hoh4347, 0: Hoh8373, 0: Hoh8431, 0: Hoh8474, conact list: Atom Atom Distance (A) Sr C6 0:G1059 4.32 Sr O6 0:G1059 3.33 Sr N3 0:C1127 3.18 Sr C2 0:C1127 3.65 Sr O2 0:C1127 3.26 Sr C4 0:C1127 4.30 Sr N4 0:C1127 4.51 Sr O2 0:U1128 4.84 Sr OP1 0:U2069 4.22 Sr P 0:U2069 4.71 Sr OP2 0:U2069 4.43 Sr OP2 0:G2070 4.02 Sr O 0:Hoh3339 3.10 Sr O 0:Hoh3744 3.22 Sr O 0:Hoh4273 3.16 Sr O 0:Hoh4347 4.22 Sr O 0:Hoh8373 4.19 Sr O 0:Hoh8431 3.69 Sr O 0:Hoh8474 4.03 interactive model: Strontium binding site 22 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 22 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G2725, 0: G2754, 0: G2755, 0: Hoh4010, 0: Hoh4025, 0: Hoh4859, 0: Hoh5553, 0: Hoh5775, 0: Hoh6243, 0: Hoh7551, 0: Hoh8465, conact list: Atom Atom Distance (A) Sr N7 0:G2725 4.84 Sr OP2 0:G2725 4.17 Sr N7 0:G2754 4.80 Sr O6 0:G2754 5.00 Sr C8 0:G2755 4.48 Sr C6 0:G2755 3.65 Sr N1 0:G2755 4.98 Sr C5 0:G2755 3.80 Sr N7 0:G2755 3.29 Sr O6 0:G2755 2.91 Sr O 0:Hoh4010 3.27 Sr O 0:Hoh4025 3.61 Sr O 0:Hoh4859 4.65 Sr O 0:Hoh5553 3.57 Sr O 0:Hoh5775 3.05 Sr O 0:Hoh6243 3.46 Sr O 0:Hoh7551 4.28 Sr O 0:Hoh8465 3.20 interactive model: Strontium binding site 23 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 23 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: A502, 0: G503, 0: G504, 0: Hoh5636, conact list: Atom Atom Distance (A) Sr OP2 0:A502 4.85 Sr C8 0:G503 4.13 Sr C6 0:G503 3.90 Sr C5 0:G503 3.80 Sr N7 0:G503 3.05 Sr OP2 0:G503 4.99 Sr O6 0:G503 3.32 Sr O6 0:G504 4.97 Sr O 0:Hoh5636 3.33 interactive model: Strontium binding site 24 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 24 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: U701, 0: G723, 0: G724, 0: G744, 0: Hoh3631, 0: Hoh4981, 0: Hoh5924, 0: Hoh7901, conact list: Atom Atom Distance (A) Sr O4 0:U701 4.54 Sr OP2 0:G723 4.60 Sr N7 0:G724 4.69 Sr O6 0:G724 4.48 Sr N7 0:G744 4.95 Sr O6 0:G744 4.72 Sr O 0:Hoh3631 3.90 Sr O 0:Hoh4981 3.32 Sr O 0:Hoh5924 3.40 Sr O 0:Hoh7901 3.13 interactive model: Strontium binding site 25 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 25 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: C2552, 0: A2553, 0: A2576, 0: A2577, 0: Mg8027, 0: Hoh3134, 0: Hoh7121, 0: Hoh7838, 0: Hoh8295, conact list: Atom Atom Distance (A) Sr OP1 0:C2552 4.96 Sr C3' 0:C2552 4.32 Sr O3' 0:C2552 4.61 Sr OP1 0:A2553 3.74 Sr P 0:A2553 3.85 Sr OP2 0:A2553 3.10 Sr OP2 0:A2576 4.30 Sr OP2 0:A2577 4.89 Sr MG 0:Mg8027 4.60 Sr O 0:Hoh3134 4.45 Sr O 0:Hoh7121 3.88 Sr O 0:Hoh7838 4.06 Sr O 0:Hoh8295 3.43 interactive model: Strontium binding site 26 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 26 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: U1109, 0: G1110, 0: U1111, 0: A1246, 0: A1247, 0: Hoh6656, 0: Hoh8096, 0: Hoh8377, conact list: Atom Atom Distance (A) Sr O3' 0:U1109 3.79 Sr P 0:G1110 4.02 Sr OP2 0:G1110 3.09 Sr C5' 0:G1110 4.28 Sr O5' 0:G1110 4.66 Sr OP2 0:U1111 4.36 Sr OP2 0:A1246 4.92 Sr OP1 0:A1247 3.95 Sr P 0:A1247 3.91 Sr OP2 0:A1247 3.03 Sr C5' 0:A1247 4.83 Sr O5' 0:A1247 4.62 Sr O 0:Hoh6656 3.63 Sr O 0:Hoh8096 3.49 Sr O 0:Hoh8377 4.92 interactive model: Strontium binding site 27 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 27 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G1541, 0: G1542, 0: G1543, 0: C1640, 0: Hoh3906, 0: Hoh5415, 0: Hoh5432, conact list: Atom Atom Distance (A) Sr P 0:G1541 5.00 Sr OP2 0:G1541 4.08 Sr O5' 0:G1541 4.97 Sr N7 0:G1542 4.62 Sr OP2 0:G1542 4.09 Sr C6 0:G1543 3.93 Sr C5 0:G1543 4.55 Sr N7 0:G1543 4.39 Sr O6 0:G1543 2.85 Sr OP2 0:C1640 4.72 Sr O 0:Hoh3906 3.02 Sr O 0:Hoh5415 3.04 Sr O 0:Hoh5432 3.52 interactive model: Strontium binding site 28 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 28 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: U10, 0: A532, 0: U533, 0: C534, 0: Hoh4610, 0: Hoh7819, 0: Hoh7820, 0: Hoh8380, conact list: Atom Atom Distance (A) Sr O4 0:U10 4.49 Sr OP1 0:A532 2.94 Sr C3' 0:A532 5.00 Sr P 0:A532 3.67 Sr OP2 0:A532 3.80 Sr C5' 0:A532 4.94 Sr O5' 0:A532 4.06 Sr OP1 0:U533 2.90 Sr P 0:U533 4.06 Sr OP2 0:U533 4.28 Sr OP1 0:C534 4.66 Sr O 0:Hoh4610 4.36 Sr O 0:Hoh7819 4.12 Sr O 0:Hoh7820 3.72 Sr O 0:Hoh8380 3.03 interactive model: Strontium binding site 29 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 29 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: A776, 0: U777, 0: C778, 0: U864, 0: Mg8024, 0: Mg8076, 0: Na8521, 0: Hoh5233, 0: Hoh6502, 0: Hoh7334, 0: Hoh7348, 0: Hoh7568, 0: Hoh7771, 0: Hoh7772, 0: Hoh8320, 0: Hoh8324, 0: Hoh8754, 1: Hoh7770, conact list: Atom Atom Distance (A) Sr O3' 0:A776 4.64 Sr OP1 0:U777 3.56 Sr P 0:U777 3.67 Sr OP2 0:U777 2.87 Sr O5' 0:U777 4.91 Sr P 0:C778 4.78 Sr OP2 0:C778 3.58 Sr C4 0:U864 4.93 Sr O4 0:U864 4.11 Sr MG 0:Mg8024 2.98 Sr MG 0:Mg8076 4.54 Sr NA 0:Na8521 3.72 Sr O 0:Hoh5233 4.13 Sr O 0:Hoh6502 3.92 Sr O 0:Hoh7334 4.14 Sr O 0:Hoh7348 3.70 Sr O 0:Hoh7568 2.87 Sr O 0:Hoh7771 3.46 Sr O 0:Hoh7772 3.92 Sr O 0:Hoh8320 4.33 Sr O 0:Hoh8324 4.54 Sr O 0:Hoh8754 4.95 Sr O 1:Hoh7770 3.78 interactive model: Strontium binding site 30 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 30 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: A2402, 0: U2419, 0: G2420, 0: G2421, 0: U2422, 0: C2423, Q: Asn49, 0: Hoh6720, 0: Hoh7848, 0: Hoh7849, 0: Hoh8428, conact list: Atom Atom Distance (A) Sr OP1 0:A2402 4.87 Sr OP1 0:U2419 4.85 Sr O3' 0:G2420 4.56 Sr OP1 0:G2421 3.13 Sr P 0:G2421 4.22 Sr OP2 0:G2421 4.66 Sr C3' 0:U2422 4.33 Sr O3' 0:U2422 3.17 Sr C2' 0:U2422 5.00 Sr C4' 0:U2422 4.47 Sr O2' 0:U2422 4.39 Sr OP1 0:C2423 3.19 Sr P 0:C2423 3.83 Sr OP2 0:C2423 5.00 Sr C5' 0:C2423 4.67 Sr O5' 0:C2423 4.75 Sr OD1 Q:Asn49 4.70 Sr O 0:Hoh6720 4.93 Sr O 0:Hoh7848 3.10 Sr O 0:Hoh7849 4.20 Sr O 0:Hoh8428 3.94 interactive model: Strontium binding site 31 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 31 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: U909, 0: C910, 0: G911, 0: G1290, 0: A1291, 0: G1292, 0: Sr8981, 0: Hoh3787, 0: Hoh3869, 0: Hoh4811, 0: Hoh7335, 0: Hoh7390, 0: Hoh7829, 0: Hoh8258, 0: Hoh9089, conact list: Atom Atom Distance (A) Sr OP1 0:U909 4.58 Sr P 0:U909 4.56 Sr OP2 0:U909 3.60 Sr OP2 0:C910 3.66 Sr O6 0:G911 4.52 Sr O3' 0:G1290 4.47 Sr OP1 0:A1291 2.81 Sr P 0:A1291 4.06 Sr OP2 0:A1291 4.72 Sr OP1 0:G1292 4.71 Sr P 0:G1292 4.14 Sr N7 0:G1292 4.75 Sr OP2 0:G1292 2.77 Sr O5' 0:G1292 5.00 Sr SR 0:Sr8981 3.68 Sr O 0:Hoh3787 3.61 Sr O 0:Hoh3869 4.11 Sr O 0:Hoh4811 4.58 Sr O 0:Hoh7335 4.09 Sr O 0:Hoh7390 3.17 Sr O 0:Hoh7829 4.64 Sr O 0:Hoh8258 3.09 Sr O 0:Hoh9089 4.78 interactive model: Strontium binding site 32 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 32 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: C838, 0: A841, 0: A843, 0: U845, 0: A846, 0: Hoh2940, 0: Hoh4777, 0: Hoh5146, 0: Hoh5353, 0: Hoh5991, 0: Hoh6208, 0: Hoh7437, conact list: Atom Atom Distance (A) Sr O2 0:C838 4.72 Sr C2 0:A841 4.90 Sr N1 0:A841 4.55 Sr N1 0:A843 4.75 Sr O2 0:U845 4.78 Sr N6 0:A846 4.57 Sr O 0:Hoh2940 2.79 Sr O 0:Hoh4777 3.56 Sr O 0:Hoh5146 4.43 Sr O 0:Hoh5353 3.47 Sr O 0:Hoh5991 3.15 Sr O 0:Hoh6208 4.06 Sr O 0:Hoh7437 3.78 interactive model: Strontium binding site 33 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 33 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: A419, 0: U420, 0: U2445, 0: Hoh3597, 0: Hoh3952, 0: Hoh4167, 0: Hoh5488, 0: Hoh6260, 0: Hoh8103, conact list: Atom Atom Distance (A) Sr OP2 0:A419 4.82 Sr O4 0:U420 4.83 Sr C4 0:U2445 4.93 Sr O4 0:U2445 3.95 Sr O 0:Hoh3597 4.89 Sr O 0:Hoh3952 3.33 Sr O 0:Hoh4167 3.34 Sr O 0:Hoh5488 3.45 Sr O 0:Hoh6260 3.87 Sr O 0:Hoh8103 4.44 interactive model: Strontium binding site 34 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 34 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: C83, 0: G84, 0: C85, T: Asp68, 0: Sr8911, 0: Hoh4403, T: Hoh3254, conact list: Atom Atom Distance (A) Sr OP1 0:C83 4.74 Sr O3' 0:G84 3.98 Sr OP1 0:C85 3.39 Sr P 0:C85 4.37 Sr CB T:Asp68 4.36 Sr OD2 T:Asp68 4.02 Sr OD1 T:Asp68 3.11 Sr CG T:Asp68 3.59 Sr CA T:Asp68 4.65 Sr SR 0:Sr8911 4.70 Sr O 0:Hoh4403 3.74 Sr O T:Hoh3254 4.96 interactive model: Strontium binding site 35 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 35 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: A2429, 0: A2465, 0: G2466, L: Asp36, L: Lys37, 0: Hoh3104, 0: Hoh4877, 0: Hoh5364, 0: Hoh7702, L: Hoh2895, L: Hoh3032, conact list: Atom Atom Distance (A) Sr N3 0:A2429 4.32 Sr C2 0:A2429 4.38 Sr O3' 0:A2465 3.89 Sr C8 0:G2466 4.14 Sr C6 0:G2466 3.69 Sr C5 0:G2466 3.65 Sr P 0:G2466 4.10 Sr N7 0:G2466 3.04 Sr C4 0:G2466 4.92 Sr OP2 0:G2466 3.07 Sr O5' 0:G2466 4.91 Sr O6 0:G2466 3.15 Sr O L:Asp36 3.11 Sr CB L:Asp36 4.25 Sr OD2 L:Asp36 4.93 Sr C L:Asp36 3.86 Sr CA L:Asp36 4.52 Sr N L:Lys37 4.69 Sr CA L:Lys37 4.93 Sr O 0:Hoh3104 3.28 Sr O 0:Hoh4877 3.52 Sr O 0:Hoh5364 3.22 Sr O 0:Hoh7702 4.22 Sr O L:Hoh2895 3.36 Sr O L:Hoh3032 4.26 interactive model: Strontium binding site 36 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 36 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G1683, 0: G1694, 0: U1696, 0: Hoh3599, 0: Hoh3699, 0: Hoh5286, 0: Hoh5829, 0: Hoh8616, conact list: Atom Atom Distance (A) Sr OP1 0:G1683 4.51 Sr P 0:G1683 4.25 Sr OP2 0:G1683 3.07 Sr OP2 0:G1694 4.99 Sr C5 0:U1696 4.99 Sr C4 0:U1696 4.56 Sr O4 0:U1696 3.50 Sr O 0:Hoh3599 3.20 Sr O 0:Hoh3699 3.67 Sr O 0:Hoh5286 4.47 Sr O 0:Hoh5829 3.07 Sr O 0:Hoh8616 4.67 interactive model: Strontium binding site 37 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 37 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: C2745, 0: A2746, 0: U2749, 0: G2750, 0: Hoh5120, 0: Hoh5667, 0: Hoh7896, X: Hoh7847, conact list: Atom Atom Distance (A) Sr OP1 0:C2745 3.66 Sr P 0:C2745 3.88 Sr OP2 0:C2745 3.68 Sr C5' 0:C2745 4.74 Sr O5' 0:C2745 3.90 Sr OP1 0:A2746 4.92 Sr P 0:A2746 4.31 Sr OP2 0:A2746 2.91 Sr O3' 0:U2749 4.59 Sr OP2 0:U2749 3.82 Sr OP1 0:G2750 3.92 Sr P 0:G2750 3.84 Sr OP2 0:G2750 2.88 Sr O 0:Hoh5120 3.79 Sr O 0:Hoh5667 4.04 Sr O 0:Hoh7896 3.06 Sr O X:Hoh7847 4.20 interactive model: Strontium binding site 38 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 38 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: A1885, 0: A1886, 0: U1887, 0: C1888, 0: G2013, 0: A2015, 0: Hoh4442, 0: Hoh5463, 0: Hoh6101, 0: Hoh8407, conact list: Atom Atom Distance (A) Sr OP1 0:A1885 2.97 Sr P 0:A1885 3.75 Sr OP2 0:A1885 3.72 Sr O5' 0:A1885 4.42 Sr C8 0:A1886 4.91 Sr P 0:A1886 4.42 Sr N7 0:A1886 4.27 Sr OP2 0:A1886 2.98 Sr C5 0:U1887 4.57 Sr C4 0:U1887 4.09 Sr O4 0:U1887 3.02 Sr N4 0:C1888 4.60 Sr O6 0:G2013 4.04 Sr N6 0:A2015 4.28 Sr O 0:Hoh4442 4.88 Sr O 0:Hoh5463 3.15 Sr O 0:Hoh6101 3.05 Sr O 0:Hoh8407 3.60 interactive model: Strontium binding site 39 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 39 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G1828, 0: A1829, 0: A2015, 0: U2016, 0: U2017, 0: Hoh3598, 0: Hoh4442, 0: Hoh7221, 0: Hoh7478, conact list: Atom Atom Distance (A) Sr OP2 0:G1828 4.54 Sr OP2 0:A1829 4.13 Sr N6 0:A2015 4.74 Sr N7 0:A2015 4.93 Sr C4 0:U2016 4.31 Sr O4 0:U2016 3.11 Sr O4 0:U2017 4.43 Sr O 0:Hoh3598 4.29 Sr O 0:Hoh4442 3.52 Sr O 0:Hoh7221 3.61 Sr O 0:Hoh7478 3.28 interactive model: Strontium binding site 40 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 40 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: C1455, 0: C1456, 0: U1457, 0: C1483, 0: G1484, 0: Hoh7775, 0: Hoh7776, 0: Hoh7835, 0: Hoh7836, 0: Hoh8363, conact list: Atom Atom Distance (A) Sr OP1 0:C1455 4.80 Sr P 0:C1455 5.00 Sr OP2 0:C1455 4.47 Sr C5 0:C1456 4.93 Sr P 0:C1456 4.81 Sr OP2 0:C1456 3.39 Sr C5 0:U1457 4.90 Sr O4 0:U1457 4.76 Sr C3' 0:C1483 4.47 Sr P 0:C1483 4.83 Sr O3' 0:C1483 4.65 Sr OP2 0:C1483 4.39 Sr O5' 0:C1483 4.43 Sr C8 0:G1484 4.46 Sr P 0:G1484 4.09 Sr N7 0:G1484 4.32 Sr OP2 0:G1484 2.83 Sr O5' 0:G1484 4.40 Sr O 0:Hoh7775 3.66 Sr O 0:Hoh7776 3.01 Sr O 0:Hoh7835 2.89 Sr O 0:Hoh7836 3.41 Sr O 0:Hoh8363 3.17 interactive model: Strontium binding site 41 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 41 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G2090, 0: G2091, 0: G2092, 0: A2649, 0: Hoh5445, 0: Hoh6257, 0: Hoh6772, 0: Hoh6904, conact list: Atom Atom Distance (A) Sr OP1 0:G2090 4.63 Sr P 0:G2090 4.71 Sr OP2 0:G2090 4.39 Sr O5' 0:G2090 4.50 Sr C8 0:G2091 4.97 Sr P 0:G2091 4.69 Sr N7 0:G2091 4.54 Sr OP2 0:G2091 3.22 Sr N7 0:G2092 4.72 Sr O6 0:G2092 4.38 Sr OP1 0:A2649 4.30 Sr O 0:Hoh5445 3.14 Sr O 0:Hoh6257 3.95 Sr O 0:Hoh6772 4.90 Sr O 0:Hoh6904 4.24 interactive model: Strontium binding site 42 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 42 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: C1687, 0: G1688, 0: A1689, 0: C1690, 2: Arg43, 0: Hoh3522, 0: Hoh3801, 0: Hoh3924, 0: Hoh6158, 0: Hoh6577, 0: Hoh8391, 0: Hoh8768, 2: Hoh5293, 2: Hoh6753, conact list: Atom Atom Distance (A) Sr OP1 0:C1687 4.88 Sr P 0:C1687 4.49 Sr OP2 0:C1687 3.34 Sr O5' 0:C1687 4.96 Sr OP2 0:G1688 3.65 Sr O3' 0:A1689 4.98 Sr OP1 0:C1690 3.74 Sr P 0:C1690 4.79 Sr O 2:Arg43 3.61 Sr C 2:Arg43 4.81 Sr O 0:Hoh3522 4.60 Sr O 0:Hoh3801 3.69 Sr O 0:Hoh3924 3.30 Sr O 0:Hoh6158 4.64 Sr O 0:Hoh6577 3.54 Sr O 0:Hoh8391 3.20 Sr O 0:Hoh8768 3.92 Sr O 2:Hoh5293 3.19 Sr O 2:Hoh6753 3.88 interactive model: Strontium binding site 43 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 43 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: U1016, 0: A2302, 0: A2303, 0: G2304, 0: A2305, 0: Hoh3740, 0: Hoh7315, 0: Hoh7735, 0: Hoh7774, 0: Hoh8178, 0: Hoh8289, 0: Hoh8420, conact list: Atom Atom Distance (A) Sr O2' 0:U1016 4.98 Sr OP1 0:A2302 2.92 Sr P 0:A2302 4.28 Sr O5' 0:A2302 4.62 Sr OP1 0:A2303 3.01 Sr P 0:A2303 4.14 Sr N7 0:A2303 4.78 Sr OP2 0:A2303 4.33 Sr O6 0:G2304 4.44 Sr N6 0:A2305 4.39 Sr O 0:Hoh3740 3.43 Sr O 0:Hoh7315 3.41 Sr O 0:Hoh7735 3.64 Sr O 0:Hoh7774 3.17 Sr O 0:Hoh8178 4.32 Sr O 0:Hoh8289 2.93 Sr O 0:Hoh8420 3.35 interactive model: Strontium binding site 44 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 44 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G820, 0: U821, 0: C822, 0: G854, 0: U855, 0: G856, 0: Hoh3915, 0: Hoh5907, 0: Hoh7325, 0: Hoh8262, 0: Hoh8403, conact list: Atom Atom Distance (A) Sr O3' 0:G820 4.18 Sr C3' 0:U821 4.75 Sr P 0:U821 3.66 Sr O3' 0:U821 4.87 Sr OP2 0:U821 2.77 Sr C5' 0:U821 4.77 Sr O5' 0:U821 3.44 Sr C5 0:C822 4.99 Sr P 0:C822 4.27 Sr OP2 0:C822 2.82 Sr OP1 0:G854 2.92 Sr P 0:G854 3.74 Sr OP2 0:G854 3.86 Sr C5' 0:G854 4.35 Sr O5' 0:G854 4.22 Sr OP1 0:U855 3.15 Sr C3' 0:U855 4.87 Sr P 0:U855 4.48 Sr C5' 0:U855 4.44 Sr O5' 0:U855 4.72 Sr OP1 0:G856 3.70 Sr P 0:G856 4.85 Sr O5' 0:G856 4.80 Sr O 0:Hoh3915 3.47 Sr O 0:Hoh5907 3.24 Sr O 0:Hoh7325 4.02 Sr O 0:Hoh8262 3.12 Sr O 0:Hoh8403 3.28 interactive model: Strontium binding site 45 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 45 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: U2693, 0: A2694, 0: G2696, 0: G2698, conact list: Atom Atom Distance (A) Sr OP1 0:U2693 4.91 Sr OP2 0:U2693 4.68 Sr OP2 0:A2694 4.96 Sr C2 0:G2696 4.89 Sr C6 0:G2696 3.71 Sr N1 0:G2696 3.66 Sr O6 0:G2696 3.00 Sr OP1 0:G2698 4.74 interactive model: Strontium binding site 46 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 46 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: U391, 0: U392, 3: Arg42, 3: Asn43, 0: Na8560, 0: Hoh3113, 0: Hoh4506, 0: Hoh5337, 0: Hoh5679, 0: Hoh5896, 3: Hoh538, 3: Hoh1308, conact list: Atom Atom Distance (A) Sr N3 0:U391 4.96 Sr C5 0:U391 4.65 Sr C4 0:U391 4.02 Sr O4 0:U391 3.17 Sr C4 0:U392 4.45 Sr O4 0:U392 3.32 Sr O 3:Arg42 3.38 Sr CB 3:Arg42 4.30 Sr C 3:Arg42 3.69 Sr CA 3:Arg42 4.53 Sr N 3:Asn43 3.99 Sr CB 3:Asn43 4.88 Sr ND2 3:Asn43 4.85 Sr OD1 3:Asn43 4.67 Sr CG 3:Asn43 4.59 Sr CA 3:Asn43 4.01 Sr NA 0:Na8560 3.66 Sr O 0:Hoh3113 4.67 Sr O 0:Hoh4506 4.62 Sr O 0:Hoh5337 4.59 Sr O 0:Hoh5679 3.62 Sr O 0:Hoh5896 4.24 Sr O 3:Hoh538 3.67 Sr O 3:Hoh1308 4.07 interactive model: Strontium binding site 47 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 47 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: U2808, 0: G2809, 0: G2810, B: Asn27, 0: Hoh7518, 0: Hoh7711, 0: Hoh8765, conact list: Atom Atom Distance (A) Sr O4 0:U2808 4.53 Sr N7 0:G2809 4.97 Sr O6 0:G2809 4.30 Sr C2 0:G2810 4.83 Sr C6 0:G2810 3.78 Sr N1 0:G2810 3.75 Sr C5 0:G2810 4.94 Sr O6 0:G2810 3.29 Sr CB B:Asn27 3.61 Sr OD1 B:Asn27 3.32 Sr CG B:Asn27 3.87 Sr CA B:Asn27 4.92 Sr O 0:Hoh7518 3.16 Sr O 0:Hoh7711 3.28 Sr O 0:Hoh8765 3.14 interactive model: Strontium binding site 48 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 48 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: C2556, 0: U2557, 0: G2558, 0: C2559, 0: Hoh3962, 0: Hoh6225, 0: Hoh6795, conact list: Atom Atom Distance (A) Sr OP2 0:C2556 4.65 Sr C5 0:U2557 4.59 Sr P 0:U2557 4.63 Sr OP2 0:U2557 3.22 Sr O5' 0:U2557 4.97 Sr N7 0:G2558 4.48 Sr O6 0:G2558 4.29 Sr N4 0:C2559 4.59 Sr O 0:Hoh3962 3.96 Sr O 0:Hoh6225 3.27 Sr O 0:Hoh6795 3.39 interactive model: Strontium binding site 49 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 49 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: A682, 0: G683, L: Asp102, 0: Hoh7891, 0: Hoh8325, conact list: Atom Atom Distance (A) Sr P 0:A682 4.64 Sr OP2 0:A682 3.23 Sr OP1 0:G683 4.41 Sr P 0:G683 4.09 Sr OP2 0:G683 2.92 Sr O5' 0:G683 4.83 Sr OD2 L:Asp102 4.31 Sr OD1 L:Asp102 3.75 Sr CG L:Asp102 4.41 Sr O 0:Hoh7891 3.29 Sr O 0:Hoh8325 3.34 interactive model: Strontium binding site 50 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 50 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: C1462, 0: U1463, 0: C1474, 1: Gly40, 1: Lys41, 1: Hoh5586, conact list: Atom Atom Distance (A) Sr O3' 0:C1462 4.10 Sr OP1 0:U1463 3.13 Sr P 0:U1463 4.06 Sr OP2 0:U1463 4.53 Sr OP1 0:C1474 3.20 Sr P 0:C1474 4.44 Sr OP2 0:C1474 4.88 Sr O 1:Gly40 3.80 Sr C 1:Gly40 4.74 Sr O 1:Lys41 4.20 Sr N 1:Lys41 4.90 Sr CB 1:Lys41 4.62 Sr C 1:Lys41 4.62 Sr CG 1:Lys41 4.34 Sr CA 1:Lys41 4.02 Sr O 1:Hoh5586 4.85 interactive model: Strontium binding site 51 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 51 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: A1133, 0: G1134, 0: G1135, 0: Hoh3049, 0: Hoh3641, 0: Hoh4514, 0: Hoh6373, 0: Hoh8342, conact list: Atom Atom Distance (A) Sr P 0:A1133 4.52 Sr OP2 0:A1133 3.10 Sr C8 0:G1134 4.90 Sr C6 0:G1134 3.97 Sr C5 0:G1134 4.20 Sr N7 0:G1134 3.70 Sr O6 0:G1134 3.12 Sr C6 0:G1135 4.98 Sr N7 0:G1135 4.96 Sr O6 0:G1135 4.21 Sr O 0:Hoh3049 3.39 Sr O 0:Hoh3641 3.37 Sr O 0:Hoh4514 3.41 Sr O 0:Hoh6373 4.36 Sr O 0:Hoh8342 3.71 interactive model: Strontium binding site 52 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 52 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: U1972, 0: G2005, 0: Hoh5400, 0: Hoh7678, conact list: Atom Atom Distance (A) Sr OP1 0:U1972 3.77 Sr P 0:U1972 4.04 Sr OP2 0:U1972 3.45 Sr O5' 0:U1972 4.69 Sr O6 0:G2005 4.67 Sr O 0:Hoh5400 3.32 Sr O 0:Hoh7678 3.49 interactive model: Strontium binding site 53 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 53 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G1112, 0: G1113, 0: A1114, 0: C1245, 0: A1246, 0: Hoh4790, 0: Hoh6408, 0: Hoh6656, 0: Hoh7246, 0: Hoh8341, 0: Hoh8351, conact list: Atom Atom Distance (A) Sr O6 0:G1112 4.92 Sr C6 0:G1113 4.32 Sr C5 0:G1113 4.49 Sr N7 0:G1113 3.94 Sr O6 0:G1113 3.53 Sr N6 0:A1114 4.60 Sr O3' 0:C1245 4.59 Sr O2' 0:C1245 4.18 Sr OP2 0:A1246 4.21 Sr O 0:Hoh4790 4.30 Sr O 0:Hoh6408 4.11 Sr O 0:Hoh6656 4.63 Sr O 0:Hoh7246 3.74 Sr O 0:Hoh8341 3.00 Sr O 0:Hoh8351 3.36 interactive model: Strontium binding site 54 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 54 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G1430, 0: U1432, 0: G1433, 0: A1434, 0: U1724, 0: Na8507, 0: Hoh3464, 0: Hoh3689, 0: Hoh3996, 0: Hoh7972, 0: Hoh8232, conact list: Atom Atom Distance (A) Sr O2' 0:G1430 4.96 Sr N3 0:U1432 4.65 Sr C6 0:U1432 4.84 Sr C5 0:U1432 3.62 Sr C4 0:U1432 3.46 Sr O4 0:U1432 2.88 Sr C6 0:G1433 4.00 Sr C5 0:G1433 4.63 Sr N7 0:G1433 4.55 Sr O6 0:G1433 2.98 Sr N6 0:A1434 4.92 Sr N3 0:U1724 3.54 Sr C2 0:U1724 3.23 Sr C6 0:U1724 4.54 Sr N1 0:U1724 3.83 Sr C5 0:U1724 4.79 Sr C1' 0:U1724 4.34 Sr O2 0:U1724 3.11 Sr C4 0:U1724 4.35 Sr C2' 0:U1724 4.01 Sr O2' 0:U1724 4.50 Sr NA 0:Na8507 3.49 Sr O 0:Hoh3464 3.32 Sr O 0:Hoh3689 4.43 Sr O 0:Hoh3996 3.21 Sr O 0:Hoh7972 4.17 Sr O 0:Hoh8232 3.41 interactive model: Strontium binding site 55 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 55 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G2284, 0: G2285, 0: Hoh4621, 0: Hoh5192, 0: Hoh6975, 0: Hoh7250, 0: Hoh7670, H: Hoh7374, conact list: Atom Atom Distance (A) Sr OP1 0:G2284 4.03 Sr C8 0:G2284 4.28 Sr C6 0:G2284 4.42 Sr C5 0:G2284 4.21 Sr N7 0:G2284 3.30 Sr O6 0:G2284 3.90 Sr C6 0:G2285 4.40 Sr C5 0:G2285 4.93 Sr N7 0:G2285 4.79 Sr O6 0:G2285 3.49 Sr O 0:Hoh4621 3.06 Sr O 0:Hoh5192 4.09 Sr O 0:Hoh6975 4.14 Sr O 0:Hoh7250 4.90 Sr O 0:Hoh7670 3.65 Sr O H:Hoh7374 4.68 interactive model: Strontium binding site 56 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 56 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: A2775, 0: A2776, 0: G2777, 0: A2778, 0: C2790, 0: Hoh7189, 0: Hoh9023, conact list: Atom Atom Distance (A) Sr OP2 0:A2775 4.72 Sr OP2 0:A2776 4.67 Sr C8 0:G2777 4.68 Sr C6 0:G2777 3.94 Sr C5 0:G2777 4.05 Sr N7 0:G2777 3.60 Sr O6 0:G2777 3.32 Sr N6 0:A2778 4.42 Sr O2 0:C2790 4.64 Sr O 0:Hoh7189 3.24 Sr O 0:Hoh9023 3.60 interactive model: Strontium binding site 57 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 57 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: A1815, 0: C1816, 0: Hoh4974, 0: Hoh5373, 0: Hoh6265, 0: Hoh7272, 0: Hoh7458, 0: Hoh7807, 0: Hoh7808, 0: Hoh8844, conact list: Atom Atom Distance (A) Sr OP1 0:A1815 3.64 Sr P 0:A1815 4.78 Sr OP2 0:A1815 4.90 Sr OP2 0:C1816 4.63 Sr O 0:Hoh4974 3.43 Sr O 0:Hoh5373 4.46 Sr O 0:Hoh6265 4.13 Sr O 0:Hoh7272 3.12 Sr O 0:Hoh7458 3.86 Sr O 0:Hoh7807 2.99 Sr O 0:Hoh7808 3.76 Sr O 0:Hoh8844 3.44 interactive model: Strontium binding site 58 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 58 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: A204, 0: C235, 0: G237, 0: Hoh3515, 0: Hoh4518, 0: Hoh4720, 0: Hoh5509, 0: Hoh7464, conact list: Atom Atom Distance (A) Sr OP1 0:A204 4.73 Sr C8 0:A204 4.81 Sr N7 0:A204 4.19 Sr OP2 0:A204 4.25 Sr N3 0:C235 4.33 Sr C2 0:C235 3.91 Sr O2 0:C235 2.82 Sr OP2 0:G237 4.51 Sr O 0:Hoh3515 3.17 Sr O 0:Hoh4518 3.01 Sr O 0:Hoh4720 3.54 Sr O 0:Hoh5509 3.03 Sr O 0:Hoh7464 3.31 interactive model: Strontium binding site 59 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 59 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: U2688, 0: U2690, 0: A2691, 0: A2703, 0: Hoh4647, 0: Hoh6592, 0: Hoh6783, conact list: Atom Atom Distance (A) Sr C5 0:U2688 4.46 Sr OP2 0:U2688 3.94 Sr O4 0:U2688 4.96 Sr C4 0:U2690 4.32 Sr O4 0:U2690 3.15 Sr N1 0:A2691 4.85 Sr OP2 0:A2703 4.64 Sr O 0:Hoh4647 3.29 Sr O 0:Hoh6592 4.59 Sr O 0:Hoh6783 4.24 interactive model: Strontium binding site 60 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 60 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G2522, H: Arg10, 9: C91, 9: G92, H: Hoh5062, 9: Hoh2549, 9: Hoh3921, 9: Hoh7454, conact list: Atom Atom Distance (A) Sr OP1 0:G2522 3.44 Sr P 0:G2522 4.54 Sr C5' 0:G2522 4.65 Sr O5' 0:G2522 4.74 Sr NH2 H:Arg10 3.88 Sr N3 9:C91 4.07 Sr C2 9:C91 4.13 Sr O2 9:C91 3.37 Sr C1' 9:G92 4.89 Sr O H:Hoh5062 4.33 Sr O 9:Hoh2549 4.49 Sr O 9:Hoh3921 3.32 Sr O 9:Hoh7454 4.14 interactive model: Strontium binding site 61 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 61 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G564, 0: A565, 0: U589, 0: A591, 0: G592, 0: Hoh4176, 0: Hoh4218, conact list: Atom Atom Distance (A) Sr C3' 0:G564 4.71 Sr O3' 0:G564 4.83 Sr C2' 0:G564 4.86 Sr OP1 0:A565 3.74 Sr P 0:A565 3.87 Sr OP2 0:A565 3.07 Sr OP1 0:U589 4.77 Sr OP2 0:U589 4.56 Sr N6 0:A591 4.51 Sr N2 0:G592 4.98 Sr C2 0:G592 4.80 Sr C6 0:G592 3.91 Sr N1 0:G592 3.63 Sr O6 0:G592 3.30 Sr O 0:Hoh4176 4.23 Sr O 0:Hoh4218 3.51 interactive model: Strontium binding site 62 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 62 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G1781, 0: G1782, 0: Hoh4232, 0: Hoh4727, 0: Hoh6276, conact list: Atom Atom Distance (A) Sr N7 0:G1781 4.50 Sr O6 0:G1781 4.74 Sr O6 0:G1782 5.00 Sr O 0:Hoh4232 4.57 Sr O 0:Hoh4727 3.30 Sr O 0:Hoh6276 4.64 interactive model: Strontium binding site 63 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 63 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G20, 0: A519, 0: Hoh3871, 0: Hoh5928, 0: Hoh7102, 0: Hoh7327, 0: Hoh7374, 0: Hoh7640, conact list: Atom Atom Distance (A) Sr N7 0:G20 4.66 Sr O6 0:G20 4.61 Sr OP1 0:A519 4.89 Sr O 0:Hoh3871 3.32 Sr O 0:Hoh5928 3.16 Sr O 0:Hoh7102 3.30 Sr O 0:Hoh7327 3.14 Sr O 0:Hoh7374 3.52 Sr O 0:Hoh7640 4.02 interactive model: Strontium binding site 64 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 64 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: U831, 0: U1835, 0: A1836, 0: Hoh6478, 0: Hoh6542, 0: Hoh7069, 0: Hoh7524, 1: Hoh2852, conact list: Atom Atom Distance (A) Sr OP1 0:U831 3.99 Sr P 0:U831 4.83 Sr OP2 0:U831 4.87 Sr OP1 0:U1835 3.82 Sr P 0:U1835 4.09 Sr OP2 0:U1835 3.36 Sr O4' 0:A1836 4.53 Sr C4' 0:A1836 4.73 Sr O 0:Hoh6478 4.40 Sr O 0:Hoh6542 3.37 Sr O 0:Hoh7069 3.80 Sr O 0:Hoh7524 3.21 Sr O 1:Hoh2852 3.55 interactive model: Strontium binding site 65 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 65 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: C1894, 0: G1896, 0: U1897, 0: G1898, 0: G1938, 0: U1939, 0: A1942, 0: Na8529, conact list: Atom Atom Distance (A) Sr C2 0:C1894 4.15 Sr N1 0:C1894 4.78 Sr C1' 0:C1894 4.32 Sr O2 0:C1894 2.95 Sr O3' 0:C1894 4.87 Sr O4' 0:C1894 4.86 Sr N7 0:G1896 4.99 Sr OP2 0:G1896 4.42 Sr C5 0:U1897 4.09 Sr C4 0:U1897 3.92 Sr O4 0:U1897 3.11 Sr C6 0:G1898 4.19 Sr C5 0:G1898 4.62 Sr N7 0:G1898 4.28 Sr O6 0:G1898 3.22 Sr O6 0:G1938 4.41 Sr N3 0:U1939 4.21 Sr C4 0:U1939 4.23 Sr O4 0:U1939 3.48 Sr N6 0:A1942 4.10 Sr NA 0:Na8529 3.59 interactive model: Strontium binding site 66 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 66 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: A1375, 0: A1381, 0: G1726, 0: G2045, 0: Hoh3300, 0: Hoh4622, 0: Hoh5257, 0: Hoh6999, conact list: Atom Atom Distance (A) Sr OP2 0:A1375 4.39 Sr C4' 0:A1375 4.97 Sr OP1 0:A1381 4.68 Sr OP2 0:G1726 4.17 Sr OP1 0:G2045 4.95 Sr O 0:Hoh3300 3.47 Sr O 0:Hoh4622 3.48 Sr O 0:Hoh5257 4.37 Sr O 0:Hoh6999 3.13 interactive model: Strontium binding site 67 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 67 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G2249, A: Glu28, A: Asp114, A: Hoh2125, conact list: Atom Atom Distance (A) Sr OP1 0:G2249 3.21 Sr P 0:G2249 4.47 Sr OP2 0:G2249 4.82 Sr OE1 A:Glu28 4.33 Sr OE2 A:Glu28 4.07 Sr CD A:Glu28 4.56 Sr O A:Asp114 4.88 Sr O A:Hoh2125 4.27 interactive model: Strontium binding site 68 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 68 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: C1126, 0: C1129, 0: U1130, 9: C91, 9: G92, 0: Hoh5437, 0: Hoh6581, 0: Hoh7866, 0: Hoh8269, 9: Hoh2357, 9: Hoh3843, conact list: Atom Atom Distance (A) Sr OP2 0:C1126 4.14 Sr N3 0:C1129 2.85 Sr C2 0:C1129 3.71 Sr N1 0:C1129 4.91 Sr C5 0:C1129 4.78 Sr O2 0:C1129 3.86 Sr C4 0:C1129 3.49 Sr N4 0:C1129 3.40 Sr O2' 0:U1130 4.73 Sr C3' 9:C91 4.35 Sr O3' 9:C91 3.20 Sr C2' 9:C91 4.81 Sr C4' 9:C91 4.60 Sr O2' 9:C91 4.07 Sr OP1 9:G92 3.23 Sr P 9:G92 3.86 Sr OP2 9:G92 4.98 Sr C5' 9:G92 4.70 Sr O5' 9:G92 4.82 Sr O 0:Hoh5437 3.21 Sr O 0:Hoh6581 3.56 Sr O 0:Hoh7866 3.91 Sr O 0:Hoh8269 3.19 Sr O 9:Hoh2357 3.59 Sr O 9:Hoh3843 4.08 interactive model: Strontium binding site 69 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 69 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: U2620, 0: C2636, 0: G2639, 0: Hoh3790, 0: Hoh3894, 0: Hoh5350, 0: Hoh6175, 0: Hoh8142, conact list: Atom Atom Distance (A) Sr OP1 0:U2620 3.89 Sr P 0:U2620 4.78 Sr OP2 0:U2620 4.65 Sr O2' 0:C2636 4.80 Sr P 0:G2639 4.94 Sr OP2 0:G2639 3.47 Sr O 0:Hoh3790 3.28 Sr O 0:Hoh3894 3.65 Sr O 0:Hoh5350 4.78 Sr O 0:Hoh6175 3.94 Sr O 0:Hoh8142 3.56 interactive model: Strontium binding site 70 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 70 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: U909, 0: G1290, 0: A1291, 0: G1292, Y: Glu165, 0: Sr8936, 0: Hoh3787, 0: Hoh3869, 0: Hoh4214, 0: Hoh7829, Y: Hoh6247, conact list: Atom Atom Distance (A) Sr OP2 0:U909 4.96 Sr C3' 0:G1290 4.72 Sr O3' 0:G1290 3.42 Sr O2' 0:G1290 4.42 Sr OP1 0:A1291 3.07 Sr C3' 0:A1291 4.52 Sr P 0:A1291 3.75 Sr O3' 0:A1291 4.12 Sr C5' 0:A1291 3.60 Sr C4' 0:A1291 4.50 Sr O5' 0:A1291 4.15 Sr OP1 0:G1292 4.17 Sr P 0:G1292 4.12 Sr OP2 0:G1292 3.61 Sr OE2 Y:Glu165 4.42 Sr SR 0:Sr8936 3.68 Sr O 0:Hoh3787 4.81 Sr O 0:Hoh3869 3.18 Sr O 0:Hoh4214 4.81 Sr O 0:Hoh7829 3.32 Sr O Y:Hoh6247 4.40 interactive model: Strontium binding site 71 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 71 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: A1746, 0: A1747, 0: U1748, 0: U1749, 0: G1752, 0: Sr8910, 0: Hoh3830, 0: Hoh5691, 0: Hoh5729, 0: Hoh8466, conact list: Atom Atom Distance (A) Sr C3' 0:A1746 4.44 Sr O3' 0:A1746 3.42 Sr C2' 0:A1746 4.62 Sr O2' 0:A1746 3.66 Sr OP1 0:A1747 4.00 Sr P 0:A1747 3.61 Sr OP2 0:A1747 3.06 Sr C5 0:U1748 4.57 Sr C4 0:U1748 4.72 Sr O4 0:U1748 4.06 Sr N3 0:U1749 4.50 Sr C4 0:U1749 4.09 Sr O4 0:U1749 3.00 Sr OP1 0:G1752 4.11 Sr P 0:G1752 4.15 Sr OP2 0:G1752 3.20 Sr SR 0:Sr8910 4.39 Sr O 0:Hoh3830 3.15 Sr O 0:Hoh5691 3.78 Sr O 0:Hoh5729 4.71 Sr O 0:Hoh8466 3.34 interactive model: Strontium binding site 72 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 72 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G911, 0: A1291, 0: G1292, 0: Hoh4369, 0: Hoh6796, 0: Hoh7956, 0: Hoh8258, 0: Hoh8747, 0: Hoh9089, conact list: Atom Atom Distance (A) Sr OP2 0:G911 3.93 Sr C6 0:A1291 4.68 Sr C5 0:A1291 4.77 Sr N6 0:A1291 3.79 Sr N7 0:A1291 4.17 Sr OP2 0:A1291 4.69 Sr C6 0:G1292 4.84 Sr O6 0:G1292 4.00 Sr O 0:Hoh4369 4.16 Sr O 0:Hoh6796 3.58 Sr O 0:Hoh7956 3.35 Sr O 0:Hoh8258 4.92 Sr O 0:Hoh8747 3.19 Sr O 0:Hoh9089 3.15 interactive model: Strontium binding site 73 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 73 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: A241, 0: A378, 0: G379, 0: A410, 0: G428, 0: A429, 0: Hoh3273, 0: Hoh3322, 0: Hoh7362, 0: Hoh8130, 0: Hoh8442, 0: Hoh8462, conact list: Atom Atom Distance (A) Sr N1 0:A241 4.95 Sr C3' 0:A378 4.83 Sr C1' 0:A378 4.95 Sr O3' 0:A378 4.61 Sr C2' 0:A378 3.79 Sr O2' 0:A378 3.03 Sr C8 0:G379 4.22 Sr C6 0:G379 4.67 Sr C5 0:G379 4.35 Sr P 0:G379 4.81 Sr N7 0:G379 3.34 Sr OP2 0:G379 3.70 Sr O6 0:G379 4.20 Sr N6 0:A410 4.25 Sr O3' 0:G428 4.84 Sr C2' 0:G428 4.97 Sr O2' 0:G428 3.92 Sr OP1 0:A429 3.23 Sr P 0:A429 3.63 Sr OP2 0:A429 3.08 Sr O5' 0:A429 4.71 Sr O 0:Hoh3273 3.21 Sr O 0:Hoh3322 3.08 Sr O 0:Hoh7362 3.49 Sr O 0:Hoh8130 4.30 Sr O 0:Hoh8442 3.89 Sr O 0:Hoh8462 4.52 interactive model: Strontium binding site 74 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 74 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G2662, 0: U2663, 0: A2811, 0: A2812, 0: A2816, 0: G2817, 0: Hoh3734, 0: Hoh8603, conact list: Atom Atom Distance (A) Sr N2 0:G2662 4.72 Sr N1 0:G2662 4.90 Sr N3 0:U2663 4.81 Sr C2 0:U2663 4.12 Sr O2 0:U2663 2.94 Sr C3' 0:A2811 3.92 Sr C1' 0:A2811 4.26 Sr O3' 0:A2811 2.94 Sr C2' 0:A2811 3.85 Sr O2' 0:A2811 2.98 Sr P 0:A2812 3.81 Sr OP2 0:A2812 3.38 Sr C5' 0:A2812 4.42 Sr O5' 0:A2812 4.62 Sr C3' 0:A2816 4.02 Sr O3' 0:A2816 3.19 Sr C2' 0:A2816 3.71 Sr O2' 0:A2816 3.04 Sr OP1 0:G2817 4.73 Sr C8 0:G2817 4.98 Sr P 0:G2817 3.71 Sr N7 0:G2817 4.77 Sr OP2 0:G2817 3.03 Sr O5' 0:G2817 4.79 Sr O 0:Hoh3734 3.58 Sr O 0:Hoh8603 4.66 interactive model: Strontium binding site 75 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 75 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G2700, 0: G2701, 0: Hoh6598, 0: Hoh8211, conact list: Atom Atom Distance (A) Sr OP1 0:G2700 4.83 Sr C8 0:G2700 4.40 Sr P 0:G2700 4.08 Sr N7 0:G2700 4.42 Sr OP2 0:G2700 3.02 Sr O5' 0:G2700 4.09 Sr N7 0:G2701 4.89 Sr O6 0:G2701 4.95 Sr O 0:Hoh6598 4.23 Sr O 0:Hoh8211 3.37 interactive model: Strontium binding site 76 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 76 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: A2622, 0: G2623, 0: A2624, 0: Hoh3415, 0: Hoh5118, 0: Hoh6981, 0: Hoh8381, 0: Hoh8444, A: Hoh4365, conact list: Atom Atom Distance (A) Sr OP1 0:A2622 3.97 Sr P 0:A2622 4.77 Sr OP2 0:A2622 4.80 Sr OP1 0:G2623 4.99 Sr C8 0:G2623 4.29 Sr C5 0:G2623 4.76 Sr P 0:G2623 4.43 Sr N7 0:G2623 3.93 Sr OP2 0:G2623 3.26 Sr O5' 0:G2623 4.71 Sr C8 0:A2624 4.23 Sr C6 0:A2624 4.83 Sr C5 0:A2624 4.42 Sr N6 0:A2624 4.29 Sr N7 0:A2624 3.39 Sr OP2 0:A2624 4.66 Sr O 0:Hoh3415 4.55 Sr O 0:Hoh5118 3.38 Sr O 0:Hoh6981 4.54 Sr O 0:Hoh8381 4.20 Sr O 0:Hoh8444 3.10 Sr O A:Hoh4365 3.75 interactive model: Strontium binding site 77 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 77 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G2616, 0: G2617, 0: G2618, 0: Mg8046, 0: Hoh4450, 0: Hoh4960, 0: Hoh5812, 0: Hoh7742, 0: Hoh7756, 0: Hoh7757, 0: Hoh8273, 0: Hoh8471, 0: Hoh8605, conact list: Atom Atom Distance (A) Sr C3' 0:G2616 4.57 Sr O3' 0:G2616 3.34 Sr C2' 0:G2616 4.75 Sr O2' 0:G2616 3.93 Sr C3' 0:G2617 4.71 Sr P 0:G2617 3.68 Sr OP2 0:G2617 3.02 Sr C5' 0:G2617 4.92 Sr O5' 0:G2617 4.00 Sr C8 0:G2618 4.54 Sr P 0:G2618 4.39 Sr N7 0:G2618 4.08 Sr OP2 0:G2618 2.98 Sr O5' 0:G2618 4.86 Sr MG 0:Mg8046 4.93 Sr O 0:Hoh4450 4.44 Sr O 0:Hoh4960 4.82 Sr O 0:Hoh5812 4.52 Sr O 0:Hoh7742 4.16 Sr O 0:Hoh7756 3.85 Sr O 0:Hoh7757 3.27 Sr O 0:Hoh8273 3.16 Sr O 0:Hoh8471 3.16 Sr O 0:Hoh8605 3.96 interactive model: Strontium binding site 78 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 78 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G1391, 0: C1426, 0: A1427, 0: A1434, 0: Hoh3800, 0: Hoh5092, 0: Hoh6441, 0: Hoh7715, conact list: Atom Atom Distance (A) Sr N2 0:G1391 4.66 Sr C3' 0:C1426 4.51 Sr O3' 0:C1426 4.44 Sr C2' 0:C1426 4.48 Sr O2' 0:C1426 3.64 Sr P 0:A1427 4.58 Sr OP2 0:A1427 3.55 Sr OP1 0:A1434 3.85 Sr O 0:Hoh3800 4.86 Sr O 0:Hoh5092 4.34 Sr O 0:Hoh6441 3.22 Sr O 0:Hoh7715 3.90 interactive model: Strontium binding site 79 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 79 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: A2112, 0: G2113, 0: C2114, 0: U2277, 0: U2278, 0: A2470, 0: G2471, 0: C2472, 0: Mg8089, 0: Hoh3770, 0: Hoh4037, 0: Hoh5111, 0: Hoh5848, 0: Hoh8401, 0: Hoh8410, conact list: Atom Atom Distance (A) Sr N6 0:A2112 4.63 Sr O6 0:G2113 4.19 Sr N4 0:C2114 4.05 Sr C5 0:U2277 4.33 Sr C4 0:U2277 4.03 Sr O4 0:U2277 3.14 Sr N3 0:U2278 4.87 Sr C4 0:U2278 4.15 Sr O4 0:U2278 3.06 Sr N6 0:A2470 4.96 Sr C6 0:G2471 4.28 Sr C5 0:G2471 5.00 Sr N7 0:G2471 4.92 Sr O6 0:G2471 3.16 Sr N4 0:C2472 4.29 Sr MG 0:Mg8089 3.41 Sr O 0:Hoh3770 3.22 Sr O 0:Hoh4037 4.18 Sr O 0:Hoh5111 3.98 Sr O 0:Hoh5848 3.35 Sr O 0:Hoh8401 4.77 Sr O 0:Hoh8410 3.27 interactive model: Strontium binding site 80 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 80 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: U845, 0: A846, 0: C847, 0: Hoh4207, 0: Hoh4233, 0: Hoh5498, 1: Hoh435, conact list: Atom Atom Distance (A) Sr O3' 0:U845 4.97 Sr OP1 0:A846 3.46 Sr P 0:A846 3.59 Sr OP2 0:A846 2.89 Sr C5' 0:A846 4.90 Sr O5' 0:A846 4.39 Sr OP2 0:C847 4.27 Sr O 0:Hoh4207 4.39 Sr O 0:Hoh4233 4.73 Sr O 0:Hoh5498 3.16 Sr O 1:Hoh435 3.36 interactive model: Strontium binding site 81 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 81 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G2609, 0: U2610, B: Gln2, 0: Hoh3054, 0: Hoh4274, 0: Hoh4740, 0: Hoh4939, 0: Hoh6221, 0: Hoh7268, 0: Hoh7341, 0: Hoh7418, 0: Hoh7653, 0: Hoh8344, 0: Hoh8368, B: Hoh2548, conact list: Atom Atom Distance (A) Sr C8 0:G2609 4.23 Sr C5 0:G2609 4.96 Sr N7 0:G2609 3.70 Sr OP2 0:G2609 4.20 Sr O4 0:U2610 4.21 Sr CB B:Gln2 4.98 Sr CG B:Gln2 4.34 Sr O 0:Hoh3054 3.91 Sr O 0:Hoh4274 4.12 Sr O 0:Hoh4740 3.10 Sr O 0:Hoh4939 4.55 Sr O 0:Hoh6221 3.91 Sr O 0:Hoh7268 4.13 Sr O 0:Hoh7341 4.52 Sr O 0:Hoh7418 4.78 Sr O 0:Hoh7653 3.15 Sr O 0:Hoh8344 3.51 Sr O 0:Hoh8368 2.97 Sr O B:Hoh2548 4.27 interactive model: Strontium binding site 82 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 82 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: A1411, 0: U1412, 0: G1681, 0: A1682, 0: Hoh3888, 0: Hoh4188, 0: Hoh4684, 0: Hoh5940, 0: Hoh6817, conact list: Atom Atom Distance (A) Sr N6 0:A1411 4.80 Sr N7 0:A1411 4.31 Sr C6 0:U1412 4.70 Sr C5 0:U1412 3.61 Sr C4 0:U1412 3.89 Sr O4 0:U1412 3.52 Sr N9 0:G1681 4.46 Sr OP1 0:G1681 4.81 Sr C3' 0:G1681 3.67 Sr C8 0:G1681 3.65 Sr C5 0:G1681 4.97 Sr C1' 0:G1681 4.93 Sr P 0:G1681 4.25 Sr N7 0:G1681 4.01 Sr O3' 0:G1681 4.21 Sr O4' 0:G1681 4.97 Sr OP2 0:G1681 3.92 Sr C5' 0:G1681 4.44 Sr C2' 0:G1681 4.51 Sr C4' 0:G1681 4.55 Sr O5' 0:G1681 3.50 Sr OP1 0:A1682 3.08 Sr P 0:A1682 4.00 Sr OP2 0:A1682 4.39 Sr O 0:Hoh3888 4.90 Sr O 0:Hoh4188 4.52 Sr O 0:Hoh4684 3.25 Sr O 0:Hoh5940 4.81 Sr O 0:Hoh6817 4.55 interactive model: Strontium binding site 83 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 83 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: A790, 0: A791, 0: G792, 0: C822, 0: U855, 0: Hoh4905, 0: Hoh5563, 0: Hoh5957, 0: Hoh7714, 0: Hoh8667, conact list: Atom Atom Distance (A) Sr OP2 0:A790 4.60 Sr C6 0:A791 4.48 Sr C5 0:A791 4.86 Sr N6 0:A791 3.40 Sr N7 0:A791 4.52 Sr N7 0:G792 4.86 Sr O6 0:G792 4.15 Sr N4 0:C822 4.81 Sr OP2 0:U855 4.82 Sr O 0:Hoh4905 3.51 Sr O 0:Hoh5563 4.65 Sr O 0:Hoh5957 4.23 Sr O 0:Hoh7714 3.48 Sr O 0:Hoh8667 3.43 interactive model: Strontium binding site 84 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 84 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G833, 0: G834, 0: U835, 0: G2643, 0: C2644, 0: Hoh3191, 0: Hoh5812, 0: Hoh5878, 0: Hoh7861, 0: Hoh8628, conact list: Atom Atom Distance (A) Sr OP1 0:G833 4.89 Sr OP1 0:G834 4.36 Sr P 0:G834 4.80 Sr OP2 0:G834 4.35 Sr N3 0:U835 4.03 Sr C2 0:U835 3.85 Sr N1 0:U835 4.70 Sr O2 0:U835 3.49 Sr C4 0:U835 4.97 Sr OP1 0:G2643 2.80 Sr P 0:G2643 3.76 Sr OP2 0:G2643 4.52 Sr C5' 0:G2643 4.00 Sr O5' 0:G2643 3.73 Sr OP1 0:C2644 3.98 Sr O 0:Hoh3191 3.16 Sr O 0:Hoh5812 3.76 Sr O 0:Hoh5878 3.92 Sr O 0:Hoh7861 4.78 Sr O 0:Hoh8628 3.34 interactive model: Strontium binding site 85 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 85 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: A788, 0: C1536, 0: Hoh5308, conact list: Atom Atom Distance (A) Sr N6 0:A788 4.61 Sr N7 0:A788 4.24 Sr OP1 0:C1536 3.64 Sr C5' 0:C1536 4.97 Sr O 0:Hoh5308 4.40 interactive model: Strontium binding site 86 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 86 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: U2589, 0: U2590, 0: C2591, 0: Hoh4734, 0: Hoh5186, 0: Hoh6678, conact list: Atom Atom Distance (A) Sr O4 0:U2589 4.95 Sr O4 0:U2590 4.87 Sr N3 0:C2591 4.80 Sr C2 0:C2591 4.59 Sr O2 0:C2591 3.58 Sr O 0:Hoh4734 4.76 Sr O 0:Hoh5186 3.99 Sr O 0:Hoh6678 3.06 interactive model: Strontium binding site 87 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 87 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: A1317, 0: A1318, 0: C1335, Y: Ser207, 0: Hoh3556, 0: Hoh4705, 0: Hoh6494, Y: Hoh3088, conact list: Atom Atom Distance (A) Sr OP1 0:A1317 3.35 Sr P 0:A1317 4.27 Sr OP2 0:A1317 4.41 Sr O5' 0:A1317 4.77 Sr OP2 0:A1318 4.29 Sr OP2 0:C1335 4.81 Sr O Y:Ser207 3.54 Sr CB Y:Ser207 4.07 Sr OG Y:Ser207 4.48 Sr C Y:Ser207 4.12 Sr CA Y:Ser207 4.52 Sr O 0:Hoh3556 4.36 Sr O 0:Hoh4705 4.40 Sr O 0:Hoh6494 3.45 Sr O Y:Hoh3088 4.63 interactive model: Strontium binding site 88 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 88 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G2102, 0: A2103, 0: U2478, 0: Hoh4764, 0: Hoh4791, 0: Hoh5086, 0: Hoh8259, conact list: Atom Atom Distance (A) Sr OP1 0:G2102 3.37 Sr C3' 0:G2102 4.96 Sr P 0:G2102 4.26 Sr O3' 0:G2102 4.24 Sr OP2 0:G2102 4.15 Sr C4' 0:G2102 5.00 Sr OP1 0:A2103 3.46 Sr P 0:A2103 4.13 Sr C5' 0:A2103 4.63 Sr O5' 0:A2103 3.84 Sr OP1 0:U2478 4.59 Sr OP2 0:U2478 4.62 Sr O 0:Hoh4764 4.95 Sr O 0:Hoh4791 4.35 Sr O 0:Hoh5086 3.86 Sr O 0:Hoh8259 4.68 interactive model: Strontium binding site 89 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 89 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G2639, 0: Hoh4355, 0: Hoh5704, 0: Hoh7657, conact list: Atom Atom Distance (A) Sr OP1 0:G2639 4.34 Sr O 0:Hoh4355 3.66 Sr O 0:Hoh5704 4.88 Sr O 0:Hoh7657 4.45 interactive model: Strontium binding site 90 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 90 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: U837, 0: C838, 0: C842, 0: G1376, 0: A1693, 0: Hoh2933, 0: Hoh3064, 0: Hoh3210, 0: Hoh3539, 0: Hoh4437, 0: Hoh8912, conact list: Atom Atom Distance (A) Sr C2' 0:U837 4.72 Sr O2' 0:U837 3.70 Sr O4' 0:C838 4.36 Sr C5' 0:C838 3.91 Sr C4' 0:C838 3.91 Sr C5 0:C842 4.62 Sr N4 0:C842 4.78 Sr N9 0:G1376 4.57 Sr N3 0:G1376 4.59 Sr C8 0:G1376 4.62 Sr C2 0:G1376 4.72 Sr C6 0:G1376 4.26 Sr N1 0:G1376 4.57 Sr C5 0:G1376 4.04 Sr N7 0:G1376 4.35 Sr C4 0:G1376 4.20 Sr O2' 0:G1376 4.52 Sr O6 0:G1376 4.73 Sr C6 0:A1693 4.71 Sr N1 0:A1693 4.58 Sr N6 0:A1693 3.95 Sr O 0:Hoh2933 3.24 Sr O 0:Hoh3064 3.48 Sr O 0:Hoh3210 3.69 Sr O 0:Hoh3539 3.74 Sr O 0:Hoh4437 3.57 Sr O 0:Hoh8912 4.26 interactive model: Strontium binding site 91 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 91 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: C1366, 0: A1367, 0: U1368, 0: A1369, R: Glu121, 0: Hoh3543, 0: Hoh3751, 0: Hoh4990, 0: Hoh5077, 0: Hoh5357, 0: Hoh7791, 0: Hoh8051, R: Hoh3654, R: Hoh4997, conact list: Atom Atom Distance (A) Sr OP2 0:C1366 4.67 Sr OP2 0:A1367 4.97 Sr C4 0:U1368 4.36 Sr O4 0:U1368 3.16 Sr C2 0:A1369 4.92 Sr N1 0:A1369 4.65 Sr OE2 R:Glu121 4.70 Sr O 0:Hoh3543 3.74 Sr O 0:Hoh3751 3.13 Sr O 0:Hoh4990 3.18 Sr O 0:Hoh5077 3.07 Sr O 0:Hoh5357 3.39 Sr O 0:Hoh7791 3.11 Sr O 0:Hoh8051 4.38 Sr O R:Hoh3654 3.13 Sr O R:Hoh4997 3.32 interactive model: Strontium binding site 92 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 92 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G2632, 0: A2633, A: Phe201, A: Gly202, A: Gly203, A: Gly204, A: His208, A: Pro209, A: Gly210, A: Hoh1017, A: Hoh2643, A: Hoh5222, conact list: Atom Atom Distance (A) Sr O3' 0:G2632 4.64 Sr OP1 0:A2633 3.18 Sr P 0:A2633 4.47 Sr O A:Phe201 2.99 Sr C A:Phe201 3.63 Sr CA A:Phe201 4.43 Sr O A:Gly202 3.28 Sr N A:Gly202 4.24 Sr C A:Gly202 3.69 Sr CA A:Gly202 4.31 Sr O A:Gly203 3.96 Sr N A:Gly203 4.28 Sr C A:Gly203 4.03 Sr CA A:Gly203 4.52 Sr N A:Gly204 4.39 Sr CA A:Gly204 4.69 Sr O A:His208 2.87 Sr NE2 A:His208 4.58 Sr N A:His208 4.95 Sr CD2 A:His208 4.45 Sr C A:His208 4.01 Sr O A:Pro209 4.90 Sr N A:Pro209 4.70 Sr C A:Pro209 4.20 Sr CA A:Pro209 4.31 Sr N A:Gly210 3.93 Sr CA A:Gly210 4.52 Sr O A:Hoh1017 4.89 Sr O A:Hoh2643 3.20 Sr O A:Hoh5222 3.44 interactive model: Strontium binding site 93 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 93 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G1873, A: Glu28, A: Asp114, A: Gly115, A: Gly116, A: Lys117, A: Arg120, 0: Hoh5200, 0: Hoh7888, A: Hoh1259, A: Hoh2125, A: Hoh3019, conact list: Atom Atom Distance (A) Sr OP2 0:G1873 4.88 Sr OE1 A:Glu28 4.30 Sr CD A:Glu28 4.57 Sr CG A:Glu28 4.32 Sr O A:Asp114 3.54 Sr C A:Asp114 4.63 Sr O A:Gly115 4.65 Sr C A:Gly115 4.56 Sr CA A:Gly115 4.79 Sr O A:Gly116 3.45 Sr N A:Gly116 4.86 Sr C A:Gly116 4.61 Sr CE A:Lys117 4.27 Sr CD A:Lys117 4.29 Sr NZ A:Lys117 3.79 Sr NH1 A:Arg120 4.41 Sr O 0:Hoh5200 3.46 Sr O 0:Hoh7888 3.45 Sr O A:Hoh1259 3.35 Sr O A:Hoh2125 3.65 Sr O A:Hoh3019 3.20 interactive model: Strontium binding site 94 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 94 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G1891, 0: C1892, A: Gly236, A: Gly237, 0: Hoh3852, 0: Hoh4012, 0: Hoh7749, 0: Hoh8229, conact list: Atom Atom Distance (A) Sr OP1 0:G1891 4.73 Sr OP2 0:G1891 4.72 Sr OP2 0:C1892 4.04 Sr O A:Gly236 4.85 Sr N A:Gly236 4.77 Sr C A:Gly236 3.99 Sr CA A:Gly236 4.15 Sr N A:Gly237 3.43 Sr CA A:Gly237 3.98 Sr O 0:Hoh3852 3.49 Sr O 0:Hoh4012 4.76 Sr O 0:Hoh7749 4.30 Sr O 0:Hoh8229 3.00 interactive model: Strontium binding site 95 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 95 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: A631, 0: G2075, B: Asn243, B: Ser245, 0: Hoh3026, 0: Hoh3490, 0: Hoh6437, 0: Hoh7477, B: Hoh1255, B: Hoh3627, conact list: Atom Atom Distance (A) Sr C6 0:A631 4.94 Sr N1 0:A631 4.52 Sr N6 0:A631 4.37 Sr OP2 0:G2075 4.74 Sr ND2 B:Asn243 3.69 Sr OD1 B:Asn243 2.94 Sr CG B:Asn243 3.71 Sr CB B:Ser245 4.07 Sr OG B:Ser245 3.22 Sr O 0:Hoh3026 4.77 Sr O 0:Hoh3490 4.46 Sr O 0:Hoh6437 3.37 Sr O 0:Hoh7477 3.26 Sr O B:Hoh1255 4.10 Sr O B:Hoh3627 3.57 interactive model: Strontium binding site 96 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 96 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: C2672, B: Arg25, B: Phe26, B: Trp29, B: Glu163, B: Arg310, B: Hoh2390, conact list: Atom Atom Distance (A) Sr OP1 0:C2672 3.29 Sr P 0:C2672 4.31 Sr OP2 0:C2672 4.88 Sr C5' 0:C2672 4.15 Sr O5' 0:C2672 4.45 Sr O B:Arg25 4.75 Sr CB B:Arg25 3.98 Sr CD B:Arg25 4.47 Sr C B:Arg25 3.86 Sr CG B:Arg25 4.83 Sr CA B:Arg25 3.86 Sr O B:Phe26 3.21 Sr N B:Phe26 3.42 Sr CB B:Phe26 4.48 Sr C B:Phe26 4.07 Sr CA B:Phe26 4.15 Sr CZ2 B:Trp29 4.55 Sr O B:Glu163 4.05 Sr CB B:Glu163 4.69 Sr C B:Glu163 4.91 Sr CZ B:Arg310 4.90 Sr NH2 B:Arg310 3.61 Sr O B:Hoh2390 3.24 interactive model: Strontium binding site 97 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 97 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: A262, F: Gln80, F: Asp81, F: Val91, F: Gly92, 0: Hoh4068, 0: Hoh5244, F: Hoh985, F: Hoh6403, conact list: Atom Atom Distance (A) Sr OP1 0:A262 4.90 Sr OP2 0:A262 4.87 Sr NE2 F:Gln80 3.76 Sr OD1 F:Asp81 4.41 Sr CG1 F:Val91 4.11 Sr N F:Gly92 4.71 Sr CA F:Gly92 4.94 Sr O 0:Hoh4068 3.97 Sr O 0:Hoh5244 3.46 Sr O F:Hoh985 3.29 Sr O F:Hoh6403 3.34 interactive model: Strontium binding site 98 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 98 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: A1133, 0: G1134, 0: G2520, H: Tyr157, H: Asn158, H: Ile160, H: Thr161, H: Pro162, H: Ser163, 0: Hoh8716, conact list: Atom Atom Distance (A) Sr C3' 0:A1133 3.53 Sr C1' 0:A1133 4.55 Sr O3' 0:A1133 2.84 Sr O4' 0:A1133 4.46 Sr C5' 0:A1133 4.61 Sr C2' 0:A1133 3.67 Sr C4' 0:A1133 3.57 Sr O2' 0:A1133 2.79 Sr OP1 0:G1134 3.85 Sr P 0:G1134 4.03 Sr C5' 0:G1134 4.58 Sr O5' 0:G1134 4.77 Sr O2' 0:G2520 3.93 Sr O H:Tyr157 3.29 Sr C H:Tyr157 4.47 Sr CA H:Asn158 4.84 Sr O H:Ile160 3.08 Sr C H:Ile160 4.10 Sr O H:Thr161 3.34 Sr N H:Thr161 4.61 Sr C H:Thr161 3.66 Sr CA H:Thr161 4.27 Sr O H:Pro162 3.29 Sr N H:Pro162 4.11 Sr C H:Pro162 3.82 Sr CA H:Pro162 4.29 Sr N H:Ser163 4.62 Sr O 0:Hoh8716 4.29 interactive model: Strontium binding site 99 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 99 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: C1102, 0: C1103, 0: U1109, J: Glu28, 0: Hoh7852, 0: Hoh7853, J: Hoh680, conact list: Atom Atom Distance (A) Sr O3' 0:C1102 4.34 Sr O2' 0:C1102 4.90 Sr OP1 0:C1103 4.27 Sr P 0:C1103 4.95 Sr C5' 0:C1103 4.74 Sr OP2 0:U1109 4.69 Sr CB J:Glu28 4.71 Sr OE2 J:Glu28 3.38 Sr CD J:Glu28 4.08 Sr CG J:Glu28 3.97 Sr O 0:Hoh7852 4.91 Sr O 0:Hoh7853 4.06 Sr O J:Hoh680 3.61 interactive model: Strontium binding site 100 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 100 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G755, 0: A1040, 0: U1041, 0: G1295, 0: A1296, L: Lys3, L: His13, L: Gly14, L: Gly15, L: Arg21, 0: Hoh6108, L: Hoh3752, L: Hoh7016, L: Hoh7681, conact list: Atom Atom Distance (A) Sr OP1 0:G755 4.33 Sr OP1 0:A1040 4.53 Sr O3' 0:A1040 4.23 Sr O2' 0:A1040 4.47 Sr OP1 0:U1041 4.42 Sr O3' 0:G1295 4.54 Sr OP1 0:A1296 3.39 Sr P 0:A1296 4.52 Sr NZ L:Lys3 4.13 Sr O L:His13 4.38 Sr O L:Gly14 3.33 Sr C L:Gly14 3.89 Sr CA L:Gly14 4.24 Sr N L:Gly15 4.80 Sr CZ L:Arg21 4.35 Sr NH2 L:Arg21 3.45 Sr NH1 L:Arg21 4.81 Sr O 0:Hoh6108 3.56 Sr O L:Hoh3752 3.16 Sr O L:Hoh7016 4.21 Sr O L:Hoh7681 4.75 interactive model: Strontium binding site 101 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 101 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: U1368, 0: G1370, 0: C2087, R: Gln61, R: Asn63, R: Na8575, R: Hoh3647, conact list: Atom Atom Distance (A) Sr OP1 0:U1368 4.72 Sr OP1 0:G1370 4.62 Sr OP1 0:C2087 4.83 Sr O R:Gln61 2.95 Sr C R:Gln61 4.16 Sr N R:Asn63 4.72 Sr ND2 R:Asn63 4.90 Sr OD1 R:Asn63 3.19 Sr CG R:Asn63 4.35 Sr NA R:Na8575 3.26 Sr O R:Hoh3647 4.57 interactive model: Strontium binding site 102 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 102 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G1444, 0: G1445, S: Asp59, 0: Hoh4349, 0: Hoh7876, 2: Hoh2485, 2: Hoh3944, 2: Hoh5203, conact list: Atom Atom Distance (A) Sr N7 0:G1444 4.86 Sr OP2 0:G1444 4.51 Sr N7 0:G1445 4.90 Sr O6 0:G1445 4.89 Sr OD2 S:Asp59 3.29 Sr OD1 S:Asp59 3.38 Sr CG S:Asp59 3.74 Sr O 0:Hoh4349 3.35 Sr O 0:Hoh7876 3.50 Sr O 2:Hoh2485 4.52 Sr O 2:Hoh3944 3.98 Sr O 2:Hoh5203 3.56 interactive model: Strontium binding site 103 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 103 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: C778, 0: A861, 0: U862, 0: U1696, 1: Lys10, 1: Lys11, 1: Asn12, 0: Hoh3520, 0: Hoh3761, 0: Hoh5389, 0: Hoh5429, 0: Hoh7334, 1: Hoh5026, conact list: Atom Atom Distance (A) Sr OP1 0:C778 4.31 Sr O3' 0:A861 4.56 Sr OP1 0:U862 2.94 Sr P 0:U862 3.78 Sr OP2 0:U862 3.76 Sr O2' 0:U1696 4.92 Sr O 1:Lys10 3.06 Sr CB 1:Lys10 3.91 Sr C 1:Lys10 3.73 Sr CG 1:Lys10 4.14 Sr CA 1:Lys10 3.85 Sr N 1:Lys11 4.84 Sr N 1:Asn12 4.74 Sr ND2 1:Asn12 4.51 Sr OD1 1:Asn12 2.86 Sr CG 1:Asn12 3.99 Sr O 0:Hoh3520 3.73 Sr O 0:Hoh3761 3.65 Sr O 0:Hoh5389 3.71 Sr O 0:Hoh5429 3.45 Sr O 0:Hoh7334 4.89 Sr O 1:Hoh5026 3.09 interactive model: Strontium binding site 104 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 104 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G180, 0: U1473, 1: Asp47, 1: Tyr48, 0: Hoh3249, 0: Hoh4520, 0: Hoh4925, 0: Hoh5764, 0: Hoh7427, 0: Hoh8599, conact list: Atom Atom Distance (A) Sr OP2 0:G180 4.88 Sr O4 0:U1473 4.89 Sr O 1:Asp47 2.85 Sr N 1:Asp47 4.25 Sr CB 1:Asp47 3.73 Sr C 1:Asp47 3.39 Sr OD1 1:Asp47 3.97 Sr CG 1:Asp47 4.38 Sr CA 1:Asp47 4.05 Sr N 1:Tyr48 4.13 Sr CA 1:Tyr48 4.37 Sr O 0:Hoh3249 3.08 Sr O 0:Hoh4520 4.54 Sr O 0:Hoh4925 3.72 Sr O 0:Hoh5764 3.15 Sr O 0:Hoh7427 3.20 Sr O 0:Hoh8599 3.44 interactive model: Strontium binding site 105 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 105 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G2121, 3: Gly45, 3: Ile46, 3: Gly47, 3: Asn48, 3: Asp49, 3: Ser53, 3: Hoh1589, 3: Hoh2484, 3: Hoh7878, 3: Hoh7879, conact list: Atom Atom Distance (A) Sr OP1 0:G2121 4.04 Sr P 0:G2121 4.65 Sr C5' 0:G2121 3.92 Sr C4' 0:G2121 4.59 Sr O5' 0:G2121 3.84 Sr O 3:Gly45 3.27 Sr C 3:Gly45 4.50 Sr C 3:Ile46 4.53 Sr O 3:Gly47 4.78 Sr N 3:Gly47 3.83 Sr C 3:Gly47 3.87 Sr CA 3:Gly47 3.98 Sr O 3:Asn48 4.21 Sr N 3:Asn48 3.41 Sr C 3:Asn48 4.03 Sr CA 3:Asn48 4.02 Sr N 3:Asp49 4.49 Sr CB 3:Asp49 4.62 Sr OD2 3:Asp49 3.78 Sr CG 3:Asp49 4.64 Sr OG 3:Ser53 4.39 Sr O 3:Hoh1589 3.81 Sr O 3:Hoh2484 3.47 Sr O 3:Hoh7878 3.47 Sr O 3:Hoh7879 3.32 interactive model: Strontium binding site 106 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 106 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 0: G2462, 3: Asp59, 3: Lys60, 3: Pro61, 0: Hoh3763, 0: Hoh5635, conact list: Atom Atom Distance (A) Sr C2 0:G2462 4.94 Sr C6 0:G2462 3.93 Sr N1 0:G2462 4.31 Sr C5 0:G2462 4.28 Sr N7 0:G2462 4.72 Sr C4 0:G2462 4.87 Sr O6 0:G2462 3.90 Sr O 3:Asp59 4.17 Sr CD 3:Lys60 4.88 Sr C 3:Lys60 4.43 Sr CG 3:Lys60 4.92 Sr CA 3:Lys60 4.15 Sr N 3:Pro61 4.17 Sr CB 3:Pro61 4.97 Sr CD 3:Pro61 3.55 Sr CG 3:Pro61 4.59 Sr O 0:Hoh3763 3.81 Sr O 0:Hoh5635 3.73 interactive model: Strontium binding site 107 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 107 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 9: G78, 9: G102, 9: Hoh7426, conact list: Atom Atom Distance (A) Sr C6 9:G78 4.33 Sr C5 9:G78 4.94 Sr N7 9:G78 4.78 Sr O6 9:G78 3.27 Sr P 9:G102 4.99 Sr OP2 9:G102 3.52 Sr O 9:Hoh7426 4.19 interactive model: Strontium binding site 108 out of 108 in 3g4s Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 108 of Strontium in the PDB 3g4s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Strontium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: 9: C31, 9: G32, 9: A44, 9: Hoh124, 9: Hoh2274, 9: Hoh4351, 9: Hoh5767, conact list: Atom Atom Distance (A) Sr C5 9:C31 4.89 Sr OP2 9:C31 4.38 Sr C8 9:G32 4.41 Sr C5 9:G32 4.96 Sr N7 9:G32 3.88 Sr OP2 9:G32 4.53 Sr P 9:A44 4.68 Sr OP2 9:A44 3.29 Sr O 9:Hoh124 3.78 Sr O 9:Hoh2274 3.68 Sr O 9:Hoh4351 3.35 Sr O 9:Hoh5767 3.29 interactive model: