Atomistry » Strontium » PDB 4rum-6ny9 » 5lt1
Atomistry »
  Strontium »
    PDB 4rum-6ny9 »
      5lt1 »

Strontium in PDB 5lt1: Nucleotide-Free Kinesin-1 Motor Domain T92V Mutant, P21 Crystal Form

Protein crystallography data

The structure of Nucleotide-Free Kinesin-1 Motor Domain T92V Mutant, P21 Crystal Form, PDB code: 5lt1 was solved by L.Cao, B.Gigant, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.35 / 1.95
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 53.903, 69.921, 100.139, 90.00, 100.81, 90.00
R / Rfree (%) 19.5 / 23.6

Strontium Binding Sites:

The binding sites of Strontium atom in the Nucleotide-Free Kinesin-1 Motor Domain T92V Mutant, P21 Crystal Form (pdb code 5lt1). This binding sites where shown within 5.0 Angstroms radius around Strontium atom.
In total only one binding site of Strontium was determined in the Nucleotide-Free Kinesin-1 Motor Domain T92V Mutant, P21 Crystal Form, PDB code: 5lt1:

Strontium binding site 1 out of 1 in 5lt1

Go back to Strontium Binding Sites List in 5lt1
Strontium binding site 1 out of 1 in the Nucleotide-Free Kinesin-1 Motor Domain T92V Mutant, P21 Crystal Form


Mono view


Stereo pair view

A full contact list of Strontium with other atoms in the Sr binding site number 1 of Nucleotide-Free Kinesin-1 Motor Domain T92V Mutant, P21 Crystal Form within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Sr403

b:0.6
occ:1.00
O B:ASN253 3.1 50.4 1.0
O B:HOH527 3.2 28.7 1.0
C B:ASN253 3.4 42.5 1.0
CB B:ASN253 3.5 46.9 1.0
O B:HOH609 3.6 34.6 1.0
N B:ASP140 3.8 19.0 1.0
CB B:SER257 3.9 34.4 1.0
N B:ILE254 3.9 42.5 1.0
CA B:ASN253 4.0 46.9 1.0
NE2 B:HIS205 4.1 26.7 1.0
CA B:ILE254 4.3 37.2 1.0
CD2 B:HIS205 4.3 27.0 1.0
CG B:ASN253 4.3 50.0 1.0
CA B:ASP140 4.3 25.2 1.0
OD1 B:ASN253 4.4 59.3 1.0
CG2 B:ILE137 4.4 21.0 1.0
N B:LEU139 4.6 29.7 1.0
O B:HOH508 4.6 62.1 1.0
OG B:SER257 4.6 38.0 1.0
O B:HOH671 4.7 17.5 1.0
C B:LEU139 4.9 29.6 1.0
CG1 B:ILE254 4.9 42.4 1.0
CB B:ASP140 4.9 35.8 1.0
CA B:LEU139 4.9 29.7 1.0
N B:SER257 5.0 31.7 1.0

Reference:

L.Cao, S.Cantos-Fernandes, B.Gigant. The Structural Switch of Nucleotide-Free Kinesin. Sci Rep V. 7 42558 2017.
ISSN: ESSN 2045-2322
PubMed: 28195215
DOI: 10.1038/SREP42558
Page generated: Wed Dec 16 02:24:38 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy