Atomistry » Strontium » PDB 4rum-6ny9 » 6h5r
Atomistry »
  Strontium »
    PDB 4rum-6ny9 »
      6h5r »

Strontium in PDB 6h5r: Structure of the Complex of A Human Telomeric Dna with Bis(1-Butyl-3- Methyl-Imidazole-2-Ylidene) Gold(I)

Protein crystallography data

The structure of Structure of the Complex of A Human Telomeric Dna with Bis(1-Butyl-3- Methyl-Imidazole-2-Ylidene) Gold(I), PDB code: 6h5r was solved by C.Bazzicalupi, P.Gratteri, F.Papi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.69 / 2.00
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 36.600, 71.370, 27.050, 90.00, 92.42, 90.00
R / Rfree (%) 22.8 / 25.3

Other elements in 6h5r:

The structure of Structure of the Complex of A Human Telomeric Dna with Bis(1-Butyl-3- Methyl-Imidazole-2-Ylidene) Gold(I) also contains other interesting chemical elements:

Gold (Au) 4 atoms
Potassium (K) 2 atoms

Strontium Binding Sites:

The binding sites of Strontium atom in the Structure of the Complex of A Human Telomeric Dna with Bis(1-Butyl-3- Methyl-Imidazole-2-Ylidene) Gold(I) (pdb code 6h5r). This binding sites where shown within 5.0 Angstroms radius around Strontium atom.
In total only one binding site of Strontium was determined in the Structure of the Complex of A Human Telomeric Dna with Bis(1-Butyl-3- Methyl-Imidazole-2-Ylidene) Gold(I), PDB code: 6h5r:

Strontium binding site 1 out of 1 in 6h5r

Go back to Strontium Binding Sites List in 6h5r
Strontium binding site 1 out of 1 in the Structure of the Complex of A Human Telomeric Dna with Bis(1-Butyl-3- Methyl-Imidazole-2-Ylidene) Gold(I)


Mono view


Stereo pair view

A full contact list of Strontium with other atoms in the Sr binding site number 1 of Structure of the Complex of A Human Telomeric Dna with Bis(1-Butyl-3- Methyl-Imidazole-2-Ylidene) Gold(I) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Sr103

b:31.4
occ:0.50
O6 A:DG3 3.1 20.3 1.0
O6 A:DG15 3.1 19.1 1.0
O6 A:DG9 3.1 20.4 1.0
O6 A:DG21 3.1 21.1 1.0
K A:K102 3.7 19.9 1.0
C6 A:DG3 3.9 22.1 1.0
C6 A:DG21 3.9 22.6 1.0
C6 A:DG15 3.9 20.7 1.0
C6 A:DG9 3.9 21.7 1.0
N1 A:DG21 4.2 22.2 1.0
N1 A:DG3 4.2 21.7 1.0
N1 A:DG9 4.2 21.4 1.0
N1 A:DG15 4.3 20.7 1.0

Reference:

F.Guarra, T.Marzo, M.Ferraroni, F.Papi, C.Bazzicalupi, P.Gratteri, G.Pescitelli, L.Messori, T.Biver, C.Gabbiani. Interaction of A Gold(I) Dicarbene Anticancer Drug with Human Telomeric Dna G-Quadruplex: Solution and Computationally Aided X-Ray Diffraction Analysis. Dalton Trans V. 47 16132 2018.
ISSN: ESSN 1477-9234
PubMed: 30378627
DOI: 10.1039/C8DT03607A
Page generated: Wed Dec 16 02:24:52 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy